RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 KLF2Q9Y5W3 355 aaPredicted RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 LINC00312Q9Y6C7 94 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 TMEM56-RWDD3S4R434 201 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 PRR14LQ5THK1 2151 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
VPS29-212ENST00000621131 HEATR1Q9H583 2144 aaKnown RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 CHD3Q12873 2000 aaKnown RBP3.7□□□□□ -1.82
VPS29-212ENST00000621131 PKDREJQ9NTG1 2253 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TRAV14DV4A0A0A6YYC5 116 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 IGHV3-43A0A0B4J1X8 118 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 IGKV1-6A0A0C4DH72 117 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 KBTBD11-OT1A0A1B0GTJ5 212 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 RAB29O14966 203 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TNFSF12O43508 249 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 SAP30O75446 220 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 MED6O75586 246 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 DEDDO75618 318 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 FSTL3O95633 263 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 IGHV3-43DP0DP04 118 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TPT1P13693 172 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 RPS2P15880 293 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 S100A1P23297 94 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 NFYBP25208 207 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 SSTR5P35346 364 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 PPP1CCP36873 323 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 P2RY1P47900 373 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 RPL23AP62750 156 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 RPL31P62899 125 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 MRPS11P82912 194 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 LTC4SQ16873 150 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 SP6Q3SY56 376 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 Q3ZCU0 254 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 LGALSLQ3ZCW2 172 aaPredicted RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 TEX261Q6UWH6 196 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 SELENOHQ8IZQ5 122 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 OR8H3Q8N146 312 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 KCNRGQ8N5I3 272 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 FAM216BQ8N7L0 139 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TPRX1Q8N7U7 411 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 SLC35G3Q8N808 338 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 GLYATL2Q8WU03 294 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 ITLN2Q8WWU7 325 aaPredicted RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 LSM10Q969L4 123 aaKnown RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 PHYHIPLQ96FC7 376 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 OR10C1Q96KK4 312 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 ZNF714Q96N38 554 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TP53RKQ96S44 253 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 S1PR3Q99500 378 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 ZNF471Q9BX82 626 aaPredicted RBP3.69□□□□□ -1.82
VPS29-212ENST00000621131 KAAG1Q9UBP8 84 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 CLN8Q9UBY8 286 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 MIOXQ9UGB7 285 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 PSG11Q9UQ72 335 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 POMT1Q9Y6A1 747 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 U3KQ87 197 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 TANC2Q9HCD6 1990 aa3.69□□□□□ -1.82
VPS29-212ENST00000621131 RAI1Q7Z5J4 1906 aaPredicted RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 A0A087WZ39 114 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 DEFB108AA8MXU0 73 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 C15orf65H3BRN8 121 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 M0R1X1 148 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 RTL8CO15255 209 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 PPIHO43447 177 aaKnown RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 APOA2P02652 100 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 TFF1P04155 84 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 RRASP10301 218 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CXCL2P19875 107 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 RPL12P30050 165 aaKnown RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 HTR2BP41595 481 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 LPAR6P43657 344 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 ARHGDIBP52566 201 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 PRRX1P54821 245 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 TFF3Q07654 80 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 EXOSC2Q13868 293 aaKnown RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 KIAA0141Q14154 515 aaPredicted RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 RTL8BQ17RB0 113 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 FAM106AQ4KMX7 169 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 TMEM155Q4W5P6 130 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 MORN2Q502X0 79 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 FAM201AQ5SY85 155 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 GPR157Q5UAW9 335 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 LAMTOR1Q6IAA8 161 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 H2BFWTQ7Z2G1 175 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 LYZL2Q7Z4W2 148 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CENPVQ7Z7K6 275 aaPredicted RBP3.68□□□□□ -1.82
VPS29-212ENST00000621131 STX12Q86Y82 276 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 DRAM1Q8N682 238 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 ZNF680Q8NEM1 530 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 OR4S2Q8NH73 311 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 UBALD1Q8TB05 177 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CORO2AQ92828 525 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 AQP10Q96PS8 301 aa3.68□□□□□ -1.82
VPS29-212ENST00000621131 CIB3Q96Q77 187 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms