RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 TPSG1Q9NRR2 321 aa14.12□□□□□ -0.15
CNOT3-209ENST00000617930 RPP30P78346 268 aaKnown RBP14.11□□□□□ -0.15
CNOT3-209ENST00000617930 HLA-DRB5Q30154 266 aa14.11□□□□□ -0.15
CNOT3-209ENST00000617930 TGIF2LXQ8IUE1 241 aa14.11□□□□□ -0.15
CNOT3-209ENST00000617930 LSM4Q9Y4Z0 139 aaKnown RBP14.11□□□□□ -0.15
CNOT3-209ENST00000617930 SMCO3A2RU48 225 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OVOL3O00110 214 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 NDUFS6O75380 124 aaKnown RBP14.1□□□□□ -0.15
CNOT3-209ENST00000617930 C10orf55Q5SWW7 151 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 PDPNQ86YL7 162 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OR4C13Q8NGP0 309 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 SPOCK3Q9BQ16 436 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 NDUFA4L2Q9NRX3 87 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 SPG11Q96JI7 2443 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 CSMD1Q96PZ7 3565 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 PFN1P07737 140 aaKnown RBP14.1□□□□□ -0.15
CNOT3-209ENST00000617930 MLANAQ16655 118 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OR4P4Q8NGL7 312 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 OR4X1Q8NH49 305 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 NEU4Q8WWR8 484 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-209ENST00000617930 PITPNC1Q9UKF7 332 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 WASHC3Q9Y3C0 194 aa14.1□□□□□ -0.15
CNOT3-209ENST00000617930 USP9YO00507 2555 aaPredicted RBP14.09□□□□□ -0.15
CNOT3-209ENST00000617930 C11orf94C9JXX5 98 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 PPP5D1E7EU14 171 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 BUB1B-PAK6H3BSN5 160 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 PHOX2AO14813 284 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 COX7A1P24310 79 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 CNTFRP26992 372 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 TMEM167AQ8TBQ9 72 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 ANAPC16Q96DE5 110 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 PLEKHA3Q9HB20 300 aa14.09□□□□□ -0.15
CNOT3-209ENST00000617930 RPL8P62917 257 aaKnown RBP14.08□□□□□ -0.15
CNOT3-209ENST00000617930 C9orf152Q5JTZ5 239 aa14.08□□□□□ -0.15
CNOT3-209ENST00000617930 OR5B3Q8NH48 314 aa14.08□□□□□ -0.15
CNOT3-209ENST00000617930 NRGNQ92686 78 aa14.08□□□□□ -0.15
CNOT3-209ENST00000617930 PACRGQ96M98 296 aaPredicted RBP14.08□□□□□ -0.15
CNOT3-209ENST00000617930 GGTLC1Q9BX51 225 aa14.08□□□□□ -0.15
CNOT3-209ENST00000617930 ZNF430Q9H8G1 570 aaPredicted RBP14.08□□□□□ -0.15
CNOT3-209ENST00000617930 CELSR2Q9HCU4 2923 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 LY6LH3BQJ8 138 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 RNASE2P10153 161 aaKnown RBP14.08□□□□□ -0.16
CNOT3-209ENST00000617930 COL8A1P27658 744 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 MIC13Q5XKP0 118 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 OR51G1Q8NGK1 321 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 RAB1CQ92928 201 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 PYGO2Q9BRQ0 406 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 ELOVL1Q9BW60 279 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 CLEC7AQ9BXN2 247 aa14.08□□□□□ -0.16
CNOT3-209ENST00000617930 PATZ1Q9HBE1 687 aaKnown RBP14.08□□□□□ -0.16
CNOT3-209ENST00000617930 A0A1W2PPQ1 181 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 A0A1W2PPV4 95 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 WT1-ASQ06250 92 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 TMEM183AQ8IXX5 376 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 OR5T1Q8NG75 326 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 TNFRSF14Q92956 283 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 CHODLQ9H9P2 273 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 ENY2Q9NPA8 101 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 ONECUT1Q9UBC0 465 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 NBPF19A0A087WUL8 3843 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 IGKV1OR2-108A0A075B7D4 117 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 SLC25A17O43808 307 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 VENTXO95231 258 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 ARF6P62330 175 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 CLEC12BQ2HXU8 276 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 PNKDQ8N490 385 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 BEND2Q8NDZ0 799 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 NPVFQ9HCQ7 196 aa14.07□□□□□ -0.16
CNOT3-209ENST00000617930 MED13LQ71F56 2210 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 IGHV1-3A0A0C4DH29 117 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 PDE6DO43924 150 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 SOX15O60248 233 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 IGHV4-39P01824 125 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 RBP4P02753 201 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 UBE2G2P60604 165 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 CST9LP1Q5W188 147 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 HCP5Q6MZN7 132 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 KCNIP4Q6PIL6 250 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 LURAP1LQ8IV03 231 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 SSMEM1Q8WWF3 244 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 HIST1H2BLQ99880 126 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 FKBP11Q9NYL4 201 aa14.06□□□□□ -0.16
CNOT3-209ENST00000617930 ENSAO43768 121 aaKnown RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 MPDU1O75352 247 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 LIPFP07098 398 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 HIST1H1BP16401 226 aaKnown RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 USF1P22415 310 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 ZFP36P26651 326 aaKnown RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 SRP14P37108 136 aaKnown RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 OPRK1P41145 380 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 PRRX1P54821 245 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 FAM3BP58499 235 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-209ENST00000617930 C2orf83Q53S99 150 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 DNLZQ5SXM8 178 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 TIMD4Q96H15 378 aa14.05□□□□□ -0.16
CNOT3-209ENST00000617930 CENPEQ02224 2701 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms