RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 IGHV2-26A0A0B4J1V2 119 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 B4DSR2 109 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 PRSS1P07477 247 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 HIST3H3Q16695 136 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 VMO1Q7Z5L0 202 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 IL22RA2Q969J5 263 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 OR51M1Q9H341 326 aa8.4□□□□□ -1.06
SMARCA1-205ENST00000617310 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.07
SMARCA1-205ENST00000617310 ZP3P21754 424 aa8.4□□□□□ -1.07
SMARCA1-205ENST00000617310 RHOGP84095 191 aa8.4□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM89BQ8N5H3 189 aa8.4□□□□□ -1.07
SMARCA1-205ENST00000617310 TUBA4BQ9H853 241 aa8.4□□□□□ -1.07
SMARCA1-205ENST00000617310 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 LAMA1P25391 3075 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 TMEM8BA6NDV4 472 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 DUTP33316 252 aaKnown RBP8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 SULT1A2P50226 295 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 MYLKQ15746 1914 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 MFSD2BA6NFX1 497 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 GPX1P07203 203 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 IGHV1-8P0DP01 117 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 MYOD1P15172 320 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 AQP10Q96PS8 301 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 RARRES2Q99969 163 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 DENND4CQ5VZ89 1909 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 C9JCJ5 164 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 PDE6DO43924 150 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 OTX1P32242 354 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 SIGIRRQ6IA17 410 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 DUX4L9Q6RFH8 374 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 HEPN1Q6WQI6 88 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 HSD17B13Q7Z5P4 300 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
SMARCA1-205ENST00000617310 KIF26AQ9ULI4 1882 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 HTN3P15516 51 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 CRISP2P16562 243 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 RELQ04864 619 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 Q5PR19 223 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 DHRS11Q6UWP2 260 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 C8orf46Q8TAG6 207 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 A0A0G2JLM5 398 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 IL6RP08887 468 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 COMPP49747 757 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 WFDC12Q8WWY7 111 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 COQ2Q96H96 371 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 C2orf16Q68DN1 1984 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 A0A0B4J293 547 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 SNRPEP62304 92 aaKnown RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 PNRC1Q12796 327 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 SPSB4Q96A44 273 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 MARVELD3Q96A59 401 aa8.38□□□□□ -1.07
SMARCA1-205ENST00000617310 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 DLX6P56179 175 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 DEFA6Q01524 100 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 PMS2P11Q13670 270 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 TMEM177Q53S58 311 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 CYP2G1PQ6ZSU1 146 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 GATAD1Q8WUU5 269 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 PLSCR2Q9NRY7 297 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 TMEM189A5PLL7 270 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 NBEAP1P0C6P0 100 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 VDAC2P45880 294 aaPredicted RBP8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 RIGQ13278 110 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 RUSC1-AS1Q66K80 236 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM166AQ6J272 317 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 RCC1LQ96I51 464 aaKnown RBP8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 RAX2Q96IS3 184 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 IGKV3OR2-268A0A0C4DH90 116 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 UPK2O00526 184 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 CGAP01215 116 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 CD33P20138 364 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 CEACAM8P31997 349 aaPredicted RBP8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 TWIST1Q15672 202 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 Q6ZR03 302 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 SNRPD3P62318 126 aaKnown RBP8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 ZNF841Q6ZN19 808 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 NRGNQ92686 78 aa8.37□□□□□ -1.07
SMARCA1-205ENST00000617310 COL4A3Q01955 1670 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 A6NNC1 897 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 RND3P61587 244 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 CX3CL1P78423 397 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 IBA57Q5T440 356 aaKnown RBP8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 GAFA1Q96PS6 74 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 NPCDR1Q9BY65 106 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms