RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 LIMS1P48059 325 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 PMS2CLQ68D20 193 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 NDUFA2O43678 99 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 CGAP01215 116 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 GZMBP10144 247 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 FGF12P61328 243 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 A0A0G2JMZ2 1700 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 LRRC37A2A6NM11 1700 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 LRRC37AA6NMS7 1700 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1B0GUS0 222 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 CA7P43166 264 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 NPVFQ9HCQ7 196 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 LHFPL6Q9Y693 200 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 HCFC1P51610 2035 aa7.4□□□□□ -1.23
CSMD1-216ENST00000602557 FAM106CPP0CH98 169 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 ITLN1Q8WWA0 313 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 MYO9AB2RTY4 2548 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 DUSP15Q9H1R2 295 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-216ENST00000602557 TRAV2A0A0B4J234 112 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 A0A0J9YW62 118 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 SELLP14151 372 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 MS4A5Q9H3V2 200 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-216ENST00000602557 HSPE1P61604 102 aaKnown RBP7.39□□□□□ -1.23
CSMD1-216ENST00000602557 RND2P52198 227 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 C9orf153Q5TBE3 101 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 SMRP1Q8NCR6 262 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 ZSWIM8A7E2V4 1837 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 PF4V1P10720 104 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 TBR1Q16650 682 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 POLR3KQ9Y2Y1 108 aaPredicted RBP7.39□□□□□ -1.23
CSMD1-216ENST00000602557 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 SIPA1L1O43166 1804 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 TRAV30A0A087WSZ9 112 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 MPDU1O75352 247 aa7.39□□□□□ -1.23
CSMD1-216ENST00000602557 LY6G6FQ5SQ64 297 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 MOB4Q9Y3A3 225 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 MGST3O14880 152 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
CSMD1-216ENST00000602557 ATP6V0BQ99437 205 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 PRSS47A8MTI9 375 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV2-70P01814 119 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 AZU1P20160 251 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 MPV17P39210 176 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 SELENOTP62341 195 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 NPIPB3Q92617 1050 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 MARS2Q96GW9 593 aaKnown RBP7.38□□□□□ -1.23
CSMD1-216ENST00000602557 GNG5P63218 68 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 JMJD8Q96S16 334 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 WBP1LQ9NX94 342 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 PRSS53Q2L4Q9 553 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1W2PQF6 199 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 FOXL1Q12952 345 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 PLXNB3Q9ULL4 1909 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 PSG3Q16557 428 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 PEX7O00628 323 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 TICRRQ7Z2Z1 1910 aa7.38□□□□□ -1.23
CSMD1-216ENST00000602557 WISP3O95389 354 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 C8orf88P0DMB2 117 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 TDGF1P13385 188 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV1-45A0A0A0MS14 117 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 CD1AP06126 327 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 NGFRP08138 427 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 IL6RP08887 468 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 MRPS16Q9Y3D3 137 aaKnown RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 CALYQ9NYX4 217 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 PCDH15Q96QU1 1955 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 A0A0G2JK05 382 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 hCG_38984A0A1B0GV85 526 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 MOSP00540 346 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 SLX1AQ9BQ83 275 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 RPS20P60866 119 aaKnown RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 FGFRL1Q8N441 504 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 RTBDNQ9BSG5 229 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 FOXI3A8MTJ6 420 aaPredicted RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 C10orf128Q5T292 105 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 HS3ST3B1Q9Y662 390 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1B0GWJ7 208 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 EVI2AP22794 236 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 ZNF56Q15929 161 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 RNF126Q9BV68 326 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 FAM231BA6NCW3 169 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 SYNGR3O43761 229 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 ATP5LO75964 103 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 GPX1P07203 203 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 MCRIP2Q9BUT9 160 aaKnown RBP7.37□□□□□ -1.23
CSMD1-216ENST00000602557 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 TSPAN7P41732 249 aa7.37□□□□□ -1.23
CSMD1-216ENST00000602557 FGF16O43320 207 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 GREM1O60565 184 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 ACTL10Q5JWF8 245 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms