RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CENPVQ7Z7K6 275 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 WFDC11Q8NEX6 87 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 RNASEH2CQ8TDP1 164 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 P2RX4Q99571 388 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 NPVFQ9HCQ7 196 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 WDR83OSQ9Y284 106 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 RFNGQ9Y644 331 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 FGF7P21781 194 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 SERF2P84101 59 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 TMEM182Q6ZP80 229 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 Q8N9W7 124 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 ZNF114Q8NC26 417 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 RSG1Q9BU20 258 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 ASH1LQ9NR48 2969 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 MPDU1O75352 247 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 PEA15Q15121 130 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 BTNL8Q6UX41 500 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 RASL11BQ9BPW5 248 aa14.03□□□□□ -0.16
SHKBP1-224ENST00000600718 HELZ2Q9BYK8 2649 aaKnown RBP14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 SMCO3A2RU48 225 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 COLCA2A8K830 154 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 PRH1P02810 166 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 AREGP15514 252 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 GPX4P36969 197 aaPredicted RBP14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 CX3CL1P78423 397 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 PVRIGQ6DKI7 326 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 C15orf54Q8N8G6 183 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 PIFOQ8TCI5 191 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 C2CD4CQ8TF44 421 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 SSMEM1Q8WWF3 244 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 CACNG8Q8WXS5 425 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 SSX3Q99909 188 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 PARP11Q9NR21 331 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 FBXO7Q9Y3I1 522 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 TNCP24821 2201 aa14.02□□□□□ -0.16
SHKBP1-224ENST00000600718 REG1AP05451 166 aa14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 ARSJQ5FYB0 599 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 AKR1C8PQ5T2L2 129 aa14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 TREML4Q6UXN2 200 aa14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 ZNF709Q8N972 641 aa14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 SMCO4Q9NRQ5 59 aa14.02□□□□□ -0.17
SHKBP1-224ENST00000600718 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 HLA-DRB1P01911 266 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 CAMLGP49069 296 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 CD69Q07108 199 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 DPPA3Q6W0C5 159 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 OR1P1Q8NH06 330 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 NANPQ8TBE9 248 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 ABHD5Q8WTS1 349 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 RBM14Q96PK6 669 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 NPCDR1Q9BY65 106 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 TMEM231Q9H6L2 316 aa14.01□□□□□ -0.17
SHKBP1-224ENST00000600718 S100A9P06702 114 aaKnown RBP14□□□□□ -0.17
SHKBP1-224ENST00000600718 RNF212Q495C1 297 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 Q6ZRG5 221 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 ARPC1AQ92747 370 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 F11RQ9Y624 299 aaKnown RBP14□□□□□ -0.17
SHKBP1-224ENST00000600718 SOX21Q9Y651 276 aaPredicted RBP14□□□□□ -0.17
SHKBP1-224ENST00000600718 APCP25054 2843 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 CR1P17927 2039 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 UBE2CO00762 179 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 FSHBP01225 129 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 ZFP82Q8N141 532 aa14□□□□□ -0.17
SHKBP1-224ENST00000600718 C5orf52A6NGY3 159 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 CORTO00230 105 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 CD5P06127 495 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 APELAP0DMC3 54 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 TEPPQ6URK8 271 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 TMEM144Q7Z5S9 345 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 FAM213BQ8TBF2 198 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 TCEAL7Q9BRU2 100 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 SLC25A33Q9BSK2 321 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 MOB4Q9Y3A3 225 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 LSM4Q9Y4Z0 139 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 POLQO75417 2590 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 NAV2Q8IVL1 2488 aa13.99□□□□□ -0.17
SHKBP1-224ENST00000600718 IGHV7-81A0A0B4J1V7 117 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 C1orf196B1AJZ1 125 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 SOX15O60248 233 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 FABP1P07148 127 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 SFTA3P0C7M3 94 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 SNRPEP62304 92 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 RAB31Q13636 194 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 GAMTQ14353 236 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 ETFRF1Q6IPR1 90 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 CIARTQ8N365 385 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 OR1L6Q8NGR2 347 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 CENPEQ02224 2701 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 LINC00587B1AMM8 73 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 MBP02144 154 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 FHITP49789 147 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 MLANAQ16655 118 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 SLC16A13Q7RTY0 426 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 C5orf56Q8N8D9 126 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 LYPD6BQ8NI32 183 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 SLC35E1Q96K37 410 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 HRH4Q9H3N8 390 aa13.98□□□□□ -0.17
SHKBP1-224ENST00000600718 A6NDX4 124 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 CRYGCP07315 174 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms