RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 C11orf1Q9H5F2 150 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 ZNF355PQ9NSJ1 428 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 LYRM2Q9NU23 88 aaPredicted RBP9.57□□□□□ -0.88
TGFB1-204ENST00000600196 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 FBXL7Q9UJT9 491 aa9.57□□□□□ -0.88
TGFB1-204ENST00000600196 RCL1Q9Y2P8 373 aaKnown RBP9.57□□□□□ -0.88
TGFB1-204ENST00000600196 TET2Q6N021 2002 aaPredicted RBP9.56□□□□□ -0.88
TGFB1-204ENST00000600196 TRAV30A0A087WSZ9 112 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 TCRBV4S1A1TA0A5B7 111 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 HAX1O00165 279 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 SIX6O95475 246 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 PAX9P55771 341 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 TPPP2P59282 170 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 RHOGP84095 191 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
TGFB1-204ENST00000600196 BAXQ07812 192 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 TCTEX1D4Q5JR98 221 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 SPSB3Q6PJ21 355 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 THAP6Q8TBB0 222 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
TGFB1-204ENST00000600196 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
TGFB1-204ENST00000600196 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 I3L2K1 104 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 SSSCA1O60232 199 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 SCGB1D2O95969 90 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 NPBWR1P48145 328 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 BCAP31P51572 246 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 MFAP4P55083 255 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 ATP6V1FQ16864 119 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 C11orf87Q6NUJ2 197 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM116Q8NCL8 245 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 OR10P1Q8NGE3 313 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 DCUN1D4Q92564 292 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 PINX1Q96BK5 328 aaKnown RBP9.55□□□□□ -0.88
TGFB1-204ENST00000600196 MAGT1Q9H0U3 335 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 KLK15Q9H2R5 256 aa9.55□□□□□ -0.88
TGFB1-204ENST00000600196 LSM5Q9Y4Y9 91 aaKnown RBP9.55□□□□□ -0.88
TGFB1-204ENST00000600196 K7EIM0 57 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM50AO95807 157 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 IFNA4P05014 189 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
TGFB1-204ENST00000600196 LGALS1P09382 135 aaKnown RBP9.54□□□□□ -0.88
TGFB1-204ENST00000600196 OR8U8P0C7N1 319 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 S100A11P31949 105 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 MFAP2P55001 183 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 S100A10P60903 97 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 HBG1P69891 147 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 HBG2P69892 147 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 CD69Q07108 199 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 SPANXN5Q5MJ07 72 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 ETV3LQ6ZN32 361 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 STX12Q86Y82 276 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM252Q8N6L7 170 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 BSCL2Q96G97 398 aaPredicted RBP9.54□□□□□ -0.88
TGFB1-204ENST00000600196 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 RANGRFQ9HD47 186 aaPredicted RBP9.54□□□□□ -0.88
TGFB1-204ENST00000600196 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
TGFB1-204ENST00000600196 I3L521 148 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 OR2J3O76001 311 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 HSPB1P04792 205 aaKnown RBP9.53□□□□□ -0.88
TGFB1-204ENST00000600196 REG1AP05451 166 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 APELAP0DMC3 54 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 CD28P10747 220 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 IAPPP10997 89 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 MYCNOSP40205 109 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 SULT1A1P50225 295 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 DLK1P80370 383 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 SPINK9Q5DT21 86 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 TCTE3Q8IZS6 198 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 OR4F17Q8NGA8 305 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 OR2T35Q8NGX2 323 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 TMEM170AQ8WVE7 144 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 MS4A10Q96PG2 267 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 OR4F4Q96R69 305 aa9.53□□□□□ -0.88
TGFB1-204ENST00000600196 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
TGFB1-204ENST00000600196 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
TGFB1-204ENST00000600196 CUBNO60494 3623 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 PMS2P5A8MQ11 134 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 H0YIZ8 118 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 NDUFB8O95169 186 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 MT-CO2P00403 227 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 FABP1P07148 127 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 ZP3P21754 424 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 NUP62P37198 522 aaPredicted RBP9.52□□□□□ -0.89
TGFB1-204ENST00000600196 OPRK1P41145 380 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 CAV2P51636 162 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
TGFB1-204ENST00000600196 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
TGFB1-204ENST00000600196 MISP3Q96FF7 219 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms