RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 C21orf62Q9NYP8 219 aa11.49□□□□□ -0.57
UPF1-202ENST00000594243 A0A1B0GU03 582 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 LGALS9O00182 355 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 CORTO00230 105 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 GPR183P32249 361 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 BTCP35070 178 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 BSCL2Q96G97 398 aaPredicted RBP11.48□□□□□ -0.57
UPF1-202ENST00000594243 SIGLEC8Q9NYZ4 499 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 TMED3Q9Y3Q3 217 aa11.48□□□□□ -0.57
UPF1-202ENST00000594243 C9orf170A2RU37 121 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 K7EIM0 57 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 HLA-AP01891 365 aaKnown RBP11.47□□□□□ -0.57
UPF1-202ENST00000594243 OR4E1P0C645 316 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 SPSB3Q6PJ21 355 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 TXN2Q99757 166 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
UPF1-202ENST00000594243 HEYLQ9NQ87 328 aaPredicted RBP11.47□□□□□ -0.57
UPF1-202ENST00000594243 ZNF256Q9Y2P7 627 aaPredicted RBP11.47□□□□□ -0.57
UPF1-202ENST00000594243 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 I3L2K1 104 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 TGOLN2O43493 480 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 MT-CO2P00403 227 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 IGLV1-51P01701 117 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 CSN3P07498 182 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.57
UPF1-202ENST00000594243 SLC25A6P12236 298 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 HTR2BP41595 481 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 MFAP4P55083 255 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 Q56UQ5 140 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 OR1S1Q8NH92 325 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.57
UPF1-202ENST00000594243 ZC4H2Q9NQZ6 224 aa11.46□□□□□ -0.57
UPF1-202ENST00000594243 WI2-2373I1.2A0A1W2PRP0 233 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 TCRBP04435 133 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 FCGR2BP31994 310 aaPredicted RBP11.45□□□□□ -0.58
UPF1-202ENST00000594243 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
UPF1-202ENST00000594243 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 MZT2BQ6NZ67 158 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 LYG2Q86SG7 212 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 NOXA1Q86UR1 476 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
UPF1-202ENST00000594243 K7EIL1 84 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
UPF1-202ENST00000594243 NXPH3O95157 252 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 LY86O95711 162 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 HOXB5P09067 269 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 ANXA7P20073 488 aaKnown RBP11.44□□□□□ -0.58
UPF1-202ENST00000594243 DHRS2Q13268 280 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 DUSP18Q8NEJ0 188 aa11.44□□□□□ -0.58
UPF1-202ENST00000594243 ZNF436Q9C0F3 470 aaPredicted RBP11.44□□□□□ -0.58
UPF1-202ENST00000594243 FAM240BA0A1B0GVZ2 78 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 FAM90A26D6RGX4 464 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
UPF1-202ENST00000594243 GNG7O60262 68 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 PITX3O75364 302 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 UPK1BO75841 260 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 IFNA21P01568 189 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 CTSGP08311 255 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 SPNP16150 400 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 NPBWR1P48145 328 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 RELQ04864 619 aaPredicted RBP11.43□□□□□ -0.58
UPF1-202ENST00000594243 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 OR2K2Q8NGT1 345 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 PRR25Q96S07 402 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 RBKSQ9H477 322 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 U3KQ87 197 aa11.43□□□□□ -0.58
UPF1-202ENST00000594243 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 A8MWP6 167 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 NDUFA4O00483 81 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 MED6O75586 246 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 FOLR2P14207 255 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 GP9P14770 177 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 CBLN1P23435 193 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 OPRK1P41145 380 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 ELLP55199 621 aaPredicted RBP11.42□□□□□ -0.58
UPF1-202ENST00000594243 ATP5IP56385 69 aaPredicted RBP11.42□□□□□ -0.58
UPF1-202ENST00000594243 ASAH1Q13510 395 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 GGNBP1Q5YKI7 109 aa11.42□□□□□ -0.58
UPF1-202ENST00000594243 RNASEH2CQ8TDP1 164 aaKnown RBP11.42□□□□□ -0.58
UPF1-202ENST00000594243 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms