RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZNF266Q14584 549 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 TNXAQ16473 311 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 SLC35E3Q7Z769 313 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 UBAC2Q8NBM4 344 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 OR5C1Q8NGR4 320 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 PINX1Q96BK5 328 aaKnown RBP9.36□□□□□ -0.91
DDX39A-219ENST00000592927 PHYHIPLQ96FC7 376 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 OR4C12Q96R67 309 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
DDX39A-219ENST00000592927 C15orf62A8K5M9 175 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 FCN1O00602 326 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 CST7O76096 145 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 IGHG2P01859 326 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 OR8U8P0C7N1 319 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 NPY1RP25929 384 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 SUB1P53999 127 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDX39A-219ENST00000592927 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
DDX39A-219ENST00000592927 PJVKQ0ZLH3 352 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 TMEM95Q3KNT9 176 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
DDX39A-219ENST00000592927 ZNF562Q6V9R5 426 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 SLC24A4Q8NFF2 622 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 OR10P1Q8NGE3 313 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 ATP5SQ99766 215 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
DDX39A-219ENST00000592927 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 CGB1A6NKQ9 187 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 PMS2P5A8MQ11 134 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 CNIH1O95406 144 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 CA2P00918 260 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 MYOD1P15172 320 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 SNCAP37840 140 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 GNB1P62873 340 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 SLC38A11Q08AI6 406 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 RPL7L1Q6DKI1 246 aaKnown RBP9.34□□□□□ -0.91
DDX39A-219ENST00000592927 LILRB2Q8N423 598 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 TMEM217Q8N7C4 229 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 ZNF680Q8NEM1 530 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 ABHD5Q8WTS1 349 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
DDX39A-219ENST00000592927 BSCL2Q96G97 398 aaPredicted RBP9.34□□□□□ -0.91
DDX39A-219ENST00000592927 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
DDX39A-219ENST00000592927 SMIM3Q9BZL3 60 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 ARV1Q9H2C2 271 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 PARP11Q9NR21 331 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 UBQLN2Q9UHD9 624 aa9.34□□□□□ -0.91
DDX39A-219ENST00000592927 LINC01548A6NM66 108 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 E7EUB6 86 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 AP4M1O00189 453 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 IFNA5P01569 189 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 OPN1MWP04001 364 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 CX3CL1P78423 397 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 OR8G2PQ6IF36 304 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 MRAPQ8TCY5 172 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 SCARB1Q8WTV0 552 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 CITED1Q99966 193 aa9.33□□□□□ -0.92
DDX39A-219ENST00000592927 PAIP2BQ9ULR5 123 aaKnown RBP9.33□□□□□ -0.92
DDX39A-219ENST00000592927 PLXNB1O43157 2135 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 G3V4G9 280 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 IFNA4P05014 189 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 RNASE2P10153 161 aaKnown RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 PROK1P58294 105 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 DLK1P80370 383 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 SSBP2P81877 361 aaPredicted RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 WT1-ASQ06250 92 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 ARL16Q0P5N6 197 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 EXOSC2Q13868 293 aaKnown RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 CLINT1Q14677 625 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 FXYD3Q14802 87 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 CENPVQ7Z7K6 275 aaPredicted RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 HAPLN4Q86UW8 402 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 KLHDC1Q8N7A1 406 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 OR10W1Q8NGF6 305 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 OR1L6Q8NGR2 347 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 FAM110DQ8TAY7 271 aaPredicted RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
DDX39A-219ENST00000592927 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
DDX39A-219ENST00000592927 GINS3Q9BRX5 216 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms