RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TGOLN2O43493 480 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 GPR183P32249 361 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
RETREG3-210ENST00000590541 KIR2DL5AQ8N109 375 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 OR2C3Q8N628 320 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 OR1P1Q8NH06 330 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
RETREG3-210ENST00000590541 ZNF436Q9C0F3 470 aaPredicted RBP12.78□□□□□ -0.36
RETREG3-210ENST00000590541 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
RETREG3-210ENST00000590541 A0A1B0GVY2 172 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 RAB3DO95716 219 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 PIGPP57054 158 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
RETREG3-210ENST00000590541 MEF2DQ14814 521 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 CLVS1Q8IUQ0 354 aaPredicted RBP12.77□□□□□ -0.37
RETREG3-210ENST00000590541 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 C21orf62Q9NYP8 219 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
RETREG3-210ENST00000590541 PKHD1P08F94 4074 aa12.77□□□□□ -0.37
RETREG3-210ENST00000590541 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 MED14OSP0DP75 135 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 FCGR2BP31994 310 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-210ENST00000590541 HSPE1P61604 102 aaKnown RBP12.76□□□□□ -0.37
RETREG3-210ENST00000590541 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 SPCS2Q15005 226 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 RNASE12Q5GAN4 147 aaKnown RBP12.76□□□□□ -0.37
RETREG3-210ENST00000590541 STEAP1BQ6NZ63 245 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 MRGPRFQ96AM1 343 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 MIXL1Q9H2W2 232 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 COPZ2Q9P299 210 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 DNAH17Q9UFH2 4485 aa12.76□□□□□ -0.37
RETREG3-210ENST00000590541 C3orf85A0A1B0GTC6 90 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 NDUFA4O00483 81 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 CTDSP2O14595 271 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 CTDSPLO15194 276 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 NOL3O60936 208 aaKnown RBP12.75□□□□□ -0.37
RETREG3-210ENST00000590541 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
RETREG3-210ENST00000590541 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
RETREG3-210ENST00000590541 ERHP84090 104 aaKnown RBP12.75□□□□□ -0.37
RETREG3-210ENST00000590541 ODF3L2Q3SX64 289 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 SMIM4Q8WVI0 70 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 TXN2Q99757 166 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 SPAG8Q99932 426 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-210ENST00000590541 DNAH11Q96DT5 4516 aa12.75□□□□□ -0.37
RETREG3-210ENST00000590541 OR2T8A6NH00 312 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 K7EIM0 57 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 CTSDP07339 412 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-210ENST00000590541 MFAP2P55001 183 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 SURF2Q15527 256 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-210ENST00000590541 LINC00336Q6ZUF6 198 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 DYNC2LI1Q8TCX1 351 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 TMEM190Q8WZ59 177 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
RETREG3-210ENST00000590541 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
RETREG3-210ENST00000590541 DISC1C4P0D8 188 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 INS-IGF2F8WCM5 200 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 K7EMT4 169 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 IFNA4P05014 189 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 PI3P19957 117 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 AKR1C2P52895 323 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 PPP5CP53041 499 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 RELQ04864 619 aaPredicted RBP12.73□□□□□ -0.37
RETREG3-210ENST00000590541 RBMS2Q15434 407 aaKnown RBP12.73□□□□□ -0.37
RETREG3-210ENST00000590541 SCGB2B2Q4G0G5 96 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 OR4D10Q8NGI6 311 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 C2CD4CQ8TF44 421 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 TP53RKQ96S44 253 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 APLNQ9ULZ1 77 aa12.73□□□□□ -0.37
RETREG3-210ENST00000590541 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
RETREG3-210ENST00000590541 TSPAN4O14817 238 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 NUPL2O15504 423 aaKnown RBP12.72□□□□□ -0.37
RETREG3-210ENST00000590541 P0C879 139 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 UCP1P25874 307 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 MFAP4P55083 255 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 TCTAP57738 103 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 IL18Q14116 193 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 Q56UQ5 140 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 OR13C8Q8NGS7 320 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 RRNAD1Q96FB5 475 aaKnown RBP12.72□□□□□ -0.37
RETREG3-210ENST00000590541 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
RETREG3-210ENST00000590541 RSL24D1Q9UHA3 163 aaKnown RBP12.72□□□□□ -0.37
RETREG3-210ENST00000590541 IGHV3-35A0A0C4DH35 117 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 C15orf62A8K5M9 175 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 SNCAP37840 140 aa12.71□□□□□ -0.37
RETREG3-210ENST00000590541 SUB1P53999 127 aaKnown RBP eCLIP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms