RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SMAD7O15105 426 aaKnown RBP9.03□□□□□ -0.96
SMAD4-205ENST00000588745 SOX15O60248 233 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 CTRB1P17538 263 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 OPRK1P41145 380 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 FHITP49789 147 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 ELLP55199 621 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-205ENST00000588745 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 ASPHD1Q5U4P2 390 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 CTRB2Q6GPI1 263 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 TMEM219Q86XT9 240 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 ZNF709Q8N972 641 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 FAM213BQ8TBF2 198 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 CACNG8Q8WXS5 425 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 MGST2Q99735 147 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 KCNIP2Q9NS61 270 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 CCDC168Q8NDH2 2452 aa9.02□□□□□ -0.96
SMAD4-205ENST00000588745 MDFIC2A0A1B0GVS7 189 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 NPIPB5A8MRT5 1133 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 TSPAN9O75954 239 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 CRYGCP07315 174 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 GAMTQ14353 236 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 TMEM41BQ5BJD5 291 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 ACSM6Q6P461 480 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 TMEM144Q7Z5S9 345 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-205ENST00000588745 OR1L6Q8NGR2 347 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 HSPB9Q9BQS6 159 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-205ENST00000588745 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 PITPNC1Q9UKF7 332 aa9.02□□□□□ -0.97
SMAD4-205ENST00000588745 MFSD2BA6NFX1 497 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 NUDT19A8MXV4 375 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 MBP02144 154 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 RAB31Q13636 194 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 LY6EQ16553 131 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 MLANAQ16655 118 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 FFAR4Q5NUL3 377 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 IL34Q6ZMJ4 242 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 C16orf82Q7Z2V1 217 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 CITED4Q96RK1 184 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 WNT10AQ9GZT5 417 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 HRH4Q9H3N8 390 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 RPRMQ9NS64 109 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 DMRT1Q9Y5R6 373 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 AKAP9Q99996 3911 aa9.01□□□□□ -0.97
SMAD4-205ENST00000588745 M0QZK8 103 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 AGPAT2O15120 278 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 ATP6V0E1O15342 81 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
SMAD4-205ENST00000588745 DEFA4P12838 97 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 RAB2AP61019 212 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 TTC9CQ8N5M4 171 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 TEX29Q8N6K0 151 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 LFNGQ8NES3 379 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 OR2T6Q8NHC8 308 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 SGMS2Q8NHU3 365 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 C22orf15Q8WYQ4 148 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 ACY3Q96HD9 319 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 PXMP4Q9Y6I8 212 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 ZANQ9Y493 2812 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 ABCA1O95477 2261 aa9□□□□□ -0.97
SMAD4-205ENST00000588745 ZNF469Q96JG9 3925 aaPredicted RBP9□□□□□ -0.97
SMAD4-205ENST00000588745 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 SH2D7A6NKC9 451 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 TSPAN15O95858 294 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 MT-CO2P00403 227 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 AMY1AP04745 511 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 M6PRP20645 277 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 S100A1P23297 94 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 OR10J1P30954 320 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 ZNF726P1Q15940 193 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 ACOT6Q3I5F7 207 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 EIF4E3Q8N5X7 224 aaKnown RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 STPG3Q8N7X2 389 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 OR5R1Q8NH85 324 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 FAM110DQ8TAY7 271 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 MRPL36Q9P0J6 103 aaKnown RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 IGLV11-55A0A075B6I3 123 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 RAB19A4D1S5 217 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 I3L2K1 104 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 CYB5BO43169 146 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 CD5LO43866 347 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 YIF1AO95070 293 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms