RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 TMEM127O75204 238 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
LINC01842-201ENST00000588275 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
LINC01842-201ENST00000588275 SPINK9Q5DT21 86 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 LEMD1Q68G75 181 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 CADM3Q8N126 398 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 ST8SIA2Q92186 375 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 TXN2Q99757 166 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
LINC01842-201ENST00000588275 DNASE2O00115 360 aaPredicted RBP12.32□□□□□ -0.44
LINC01842-201ENST00000588275 NAT1P18440 290 aa12.32□□□□□ -0.44
LINC01842-201ENST00000588275 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
LINC01842-201ENST00000588275 FAM90A2PQ658T7 463 aa12.32□□□□□ -0.44
LINC01842-201ENST00000588275 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
LINC01842-201ENST00000588275 KRTAP17-1Q9BYP8 105 aa12.32□□□□□ -0.44
LINC01842-201ENST00000588275 C11orf68Q9H3H3 251 aaKnown RBP12.32□□□□□ -0.44
LINC01842-201ENST00000588275 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
LINC01842-201ENST00000588275 DEFB131AP59861 70 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 ERHP84090 104 aaKnown RBP12.31□□□□□ -0.44
LINC01842-201ENST00000588275 TMEM187Q14656 261 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 TOMM20LQ6UXN7 152 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 MS4A6AQ9H2W1 248 aa12.31□□□□□ -0.44
LINC01842-201ENST00000588275 DFFBO76075 338 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 APOHP02749 345 aaPredicted RBP12.3□□□□□ -0.44
LINC01842-201ENST00000588275 HSPE1P61604 102 aaKnown RBP12.3□□□□□ -0.44
LINC01842-201ENST00000588275 IZUMO4Q1ZYL8 232 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 RABAC1Q9UI14 185 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01842-201ENST00000588275 DNAH6Q9C0G6 4158 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 HERC2O95714 4834 aa12.3□□□□□ -0.44
LINC01842-201ENST00000588275 NPBWR1P48145 328 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 SNX29P2Q8IUI4 249 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 STHQ8IWL8 128 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 FAM24BQ8N5W8 94 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 DUSP18Q8NEJ0 188 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 FAM212BQ9NTI7 297 aaPredicted RBP12.29□□□□□ -0.44
LINC01842-201ENST00000588275 HECTD4Q9Y4D8 3996 aa12.29□□□□□ -0.44
LINC01842-201ENST00000588275 CD5P06127 495 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 SNCAP37840 140 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 GPX8Q8TED1 209 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 VSIRQ9H7M9 311 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
LINC01842-201ENST00000588275 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 IGLL5B9A064 214 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PGAM2P15259 253 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 AKR1C2P52895 323 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PRR20EP86478 221 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PRR20CP86479 221 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PRR20DP86480 221 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PRR20BP86481 221 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 PRR20AP86496 221 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 KCTD21Q4G0X4 260 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 RNASE12Q5GAN4 147 aaKnown RBP12.27□□□□□ -0.45
LINC01842-201ENST00000588275 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 TMEM231Q9H6L2 316 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.45
LINC01842-201ENST00000588275 M0QYG6 137 aa12.26□□□□□ -0.45
LINC01842-201ENST00000588275 IFNA17P01571 189 aa12.26□□□□□ -0.45
LINC01842-201ENST00000588275 RCVRNP35243 200 aa12.26□□□□□ -0.45
LINC01842-201ENST00000588275 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
LINC01842-201ENST00000588275 PDCD10Q9BUL8 212 aa12.26□□□□□ -0.45
LINC01842-201ENST00000588275 A0A1B0GU03 582 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 PI3P19957 117 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 UCP3P55916 312 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 YIPF6Q96EC8 236 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 SCPEP1Q9HB40 452 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 VCX3AQ9NNX9 186 aa12.25□□□□□ -0.45
LINC01842-201ENST00000588275 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 A0A1W2PS18 150 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 AGRNO00468 2067 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 TMEM50AO95807 157 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 IGKV1-5P01602 117 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 NPPCP23582 126 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 OPRK1P41145 380 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 METTL26Q96S19 204 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 ENY2Q9NPA8 101 aa12.24□□□□□ -0.45
LINC01842-201ENST00000588275 KNCNA6PVL3 124 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 APOA1P02647 267 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 ZNF688P0C7X2 276 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 ETV6P41212 452 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 PPP5CP53041 499 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 SUB1P53999 127 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC01842-201ENST00000588275 PIGPP57054 158 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 TCTAP57738 103 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 TRIM16LQ309B1 348 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 CENPSQ8N2Z9 138 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 Q8NAQ8 132 aa12.23□□□□□ -0.45
LINC01842-201ENST00000588275 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms