RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
MKS1-209ENST00000580127 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 A0A1W2PS18 150 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 SCGB2A1O75556 95 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 SUB1P53999 127 aaKnown RBP eCLIP13.12□□□□□ -0.31
MKS1-209ENST00000580127 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
MKS1-209ENST00000580127 ZNF124Q15973 351 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 STHQ8IWL8 128 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 ZNF114Q8NC26 417 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 RNF167Q9H6Y7 350 aa13.12□□□□□ -0.31
MKS1-209ENST00000580127 IGHV3OR16-13A0A075B7E8 117 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 IGHV3-74A0A0B4J1X5 117 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 NAT1P18440 290 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 PRCDQ00LT1 54 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 NARS2Q96I59 477 aaKnown RBP13.11□□□□□ -0.31
MKS1-209ENST00000580127 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
MKS1-209ENST00000580127 IGLL5B9A064 214 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 ATG12O94817 140 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 NPPCP23582 126 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 DEFB131AP59861 70 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 ZNF600Q6ZNG1 722 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 VSIRQ9H7M9 311 aa13.1□□□□□ -0.31
MKS1-209ENST00000580127 CORTO00230 105 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 HRH1P35367 487 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 TAS2R20P59543 309 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
MKS1-209ENST00000580127 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 SEC22AQ96IW7 307 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 ANAPC10Q9UM13 185 aa13.09□□□□□ -0.31
MKS1-209ENST00000580127 DBX1A6NMT0 343 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 DEFB4AO15263 64 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 IGHV3-48P01763 117 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 HLA-DMAP28067 261 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
MKS1-209ENST00000580127 NEDD8Q15843 81 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 ST8SIA2Q92186 375 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 PDCD10Q9BUL8 212 aa13.08□□□□□ -0.32
MKS1-209ENST00000580127 PUS1Q9Y606 427 aaKnown RBP eCLIP13.08□□□□□ -0.32
MKS1-209ENST00000580127 SPP1P10451 314 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 MIFP14174 115 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 UCP3P55916 312 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 SLC35G3Q8N808 338 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 METTL26Q96S19 204 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 ENY2Q9NPA8 101 aa13.07□□□□□ -0.32
MKS1-209ENST00000580127 TMEM50AO95807 157 aa13.06□□□□□ -0.32
MKS1-209ENST00000580127 IFNA17P01571 189 aa13.06□□□□□ -0.32
MKS1-209ENST00000580127 TMEM230Q96A57 120 aa13.06□□□□□ -0.32
MKS1-209ENST00000580127 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
MKS1-209ENST00000580127 TRAV10A0A0B4J240 114 aa13.05□□□□□ -0.32
MKS1-209ENST00000580127 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
MKS1-209ENST00000580127 LINC00336Q6ZUF6 198 aa13.05□□□□□ -0.32
MKS1-209ENST00000580127 MRGPRFQ96AM1 343 aa13.05□□□□□ -0.32
MKS1-209ENST00000580127 APLNQ9ULZ1 77 aa13.05□□□□□ -0.32
MKS1-209ENST00000580127 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 IGHV3-66A0A0C4DH42 116 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
MKS1-209ENST00000580127 PRR20EP86478 221 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 PRR20CP86479 221 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 PRR20DP86480 221 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 PRR20BP86481 221 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 PRR20AP86496 221 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 STXBP6Q8NFX7 210 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 VCX3AQ9NNX9 186 aa13.04□□□□□ -0.32
MKS1-209ENST00000580127 INS-IGF2F8WCM5 200 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
MKS1-209ENST00000580127 PGAM2P15259 253 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 HLA-DMBP28068 263 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 RCVRNP35243 200 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 GPX8Q8TED1 209 aa13.03□□□□□ -0.32
MKS1-209ENST00000580127 ZNF486Q96H40 463 aaPredicted RBP13.03□□□□□ -0.32
MKS1-209ENST00000580127 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
MKS1-209ENST00000580127 AKR1C2P52895 323 aa13.02□□□□□ -0.33
MKS1-209ENST00000580127 NUTF2P61970 127 aaKnown RBP13.02□□□□□ -0.33
MKS1-209ENST00000580127 Q8NAQ8 132 aa13.02□□□□□ -0.33
MKS1-209ENST00000580127 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
MKS1-209ENST00000580127 HELTA6NFD8 242 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 K7EQG2 157 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 CLN5O75503 358 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 ATP6V1G2O95670 118 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 IGKV1-39P01597 117 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 APOA1P02647 267 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 IGKV1D-39P04432 117 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 NPY1RP25929 384 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 CRYBB3P26998 211 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 OPRK1P41145 380 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 RPL5P46777 297 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms