RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SSX5O60225 188 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 PPYP01298 95 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 CD74P04233 296 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 FCER2P06734 321 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 HTN3P15516 51 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 MYL9P24844 172 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 TOMM20LQ6UXN7 152 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 TMEM17Q86X19 198 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 TMEM56Q96MV1 263 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 TMEM231Q9H6L2 316 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 PLEKHA2Q9HB19 425 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 ACOT13Q9NPJ3 140 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 COMMD9Q9P000 198 aa8.74□□□□□ -1.01
PRPF8-208ENST00000573716 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 TRAV2A0A0B4J234 112 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 MARCH11A6NNE9 402 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 CASQ2O14958 399 aaPredicted RBP8.73□□□□□ -1.01
PRPF8-208ENST00000573716 MT-CO2P00403 227 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 KRASP01116 189 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 RAB3BP20337 219 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 TNP2Q05952 138 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 MSMO1Q15800 293 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 ZNF818PQ6ZRF7 136 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 TPRA1Q86W33 373 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 Q8N1X5 172 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 TSPAN14Q8NG11 270 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 MOB3AQ96BX8 217 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 TXN2Q99757 166 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 VSIRQ9H7M9 311 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 C8orf4Q9NR00 106 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 XCL2Q9UBD3 114 aa8.73□□□□□ -1.01
PRPF8-208ENST00000573716 I3L2K1 104 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 K7EQG2 157 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 FGF2P09038 288 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 G6PCP35575 357 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 MLLT11Q13015 90 aaPredicted RBP8.72□□□□□ -1.01
PRPF8-208ENST00000573716 CSNK1G2-AS1Q8NCQ2 148 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 BEST4Q8NFU0 473 aa8.72□□□□□ -1.01
PRPF8-208ENST00000573716 PUS1Q9Y606 427 aaKnown RBP eCLIP8.72□□□□□ -1.01
PRPF8-208ENST00000573716 TRAV1-2A0A0B4J238 106 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 RLN1P04808 185 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 LPAR6P43657 344 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 HERV-K104P61576 105 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 MGLLQ99685 303 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 PRNDQ9UKY0 176 aa8.71□□□□□ -1.02
PRPF8-208ENST00000573716 IGHV3OR16-12A0A075B7B8 117 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 RGS10O43665 173 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 NPPCP23582 126 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 RNF212Q495C1 297 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 PSMG4Q5JS54 123 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 GRAMD2BQ96HH9 432 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 TMED3Q9Y3Q3 217 aa8.7□□□□□ -1.02
PRPF8-208ENST00000573716 A0A1W2PS18 150 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 DBX1A6NMT0 343 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 F2RP25116 425 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 P2RY1P47900 373 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 NPBWR1P48145 328 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 NUTF2P61970 127 aaKnown RBP8.69□□□□□ -1.02
PRPF8-208ENST00000573716 DHRS2Q13268 280 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 FCAMRQ8WWV6 532 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 NARS2Q96I59 477 aaKnown RBP8.69□□□□□ -1.02
PRPF8-208ENST00000573716 METTL26Q96S19 204 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 RAB40CQ96S21 281 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 TPRKBQ9Y3C4 175 aa8.69□□□□□ -1.02
PRPF8-208ENST00000573716 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
PRPF8-208ENST00000573716 A0A1B0GU03 582 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 HELTA6NFD8 242 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 SCGNO76038 276 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 PPP5CP53041 499 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 C22orf42Q6IC83 251 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 FAM210BQ96KR6 192 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
PRPF8-208ENST00000573716 TRAV18A0A075B6X5 111 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 GNRHRP30968 328 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 SPINK9Q5DT21 86 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 TMEM88Q6PEY1 159 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 ZNF367Q7RTV3 350 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 OR4A16Q8NH70 328 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 LGALS14Q8TCE9 139 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 BORCS5Q969J3 196 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 TMEM230Q96A57 120 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 TSC22D3Q99576 134 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 RNF167Q9H6Y7 350 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 DAPK2Q9UIK4 370 aa8.67□□□□□ -1.02
PRPF8-208ENST00000573716 TMEM189A5PLL7 270 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 MEIS3P1A6NDR6 274 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 PGLYRP1O75594 196 aaPredicted RBP8.66□□□□□ -1.02
PRPF8-208ENST00000573716 IGKV3-20P01619 116 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 EIF2B2P49770 351 aaKnown RBP8.66□□□□□ -1.02
PRPF8-208ENST00000573716 FXYD7P58549 80 aa8.66□□□□□ -1.02
PRPF8-208ENST00000573716 ERHP84090 104 aaKnown RBP8.66□□□□□ -1.02
PRPF8-208ENST00000573716 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms