RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 LYL1P12980 280 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 S100A10P60903 97 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
COMMD4-225ENST00000569245 RUNX1Q01196 453 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 FHL3Q13643 280 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 TNXAQ16473 311 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 LRRC37A5PQ49AS3 106 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 THAP6Q8TBB0 222 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
COMMD4-225ENST00000569245 LSM5Q9Y4Y9 91 aaKnown RBP11.21□□□□□ -0.61
COMMD4-225ENST00000569245 MSGN1A6NI15 193 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 WRBO00258 174 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 LY86O95711 162 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 IFNA17P01571 189 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
COMMD4-225ENST00000569245 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 EGFEM1PQ0D2K5 195 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 HYLS1Q96M11 299 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 TMEM68Q96MH6 324 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 MAGT1Q9H0U3 335 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 RBKSQ9H477 322 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
COMMD4-225ENST00000569245 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 E5RGE8 158 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 LINC01619G3V211 115 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 NXPH3O95157 252 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 MYOD1P15172 320 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 PVALBP20472 110 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-225ENST00000569245 SSBP2P81877 361 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-225ENST00000569245 ZFP69Q49AA0 526 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 OR11H4Q8NGC9 324 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-225ENST00000569245 OR5AC2Q9NZP5 309 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 MBD2Q9UBB5 411 aa11.19□□□□□ -0.62
COMMD4-225ENST00000569245 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 HMSDA8MTL9 139 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 H3BUA1 57 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 K7EIL1 84 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 SSSCA1O60232 199 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
COMMD4-225ENST00000569245 SLURP1P55000 103 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 PAX9P55771 341 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 TAS2R30P59541 319 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 NOXA1Q86UR1 476 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 DTD1Q8TEA8 209 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
COMMD4-225ENST00000569245 DCUN1D4Q92564 292 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
COMMD4-225ENST00000569245 IGHV4OR15-8A0A075B7B6 117 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 A0A087WW49 117 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 E7EUB6 86 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 L7N2F9 121 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 OVOL1O14753 267 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 TMEM50AO95807 157 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
COMMD4-225ENST00000569245 P2RY1P47900 373 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 VAMP2P63027 116 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 C10orf55Q5SWW7 151 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
COMMD4-225ENST00000569245 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 ENY2Q9NPA8 101 aa11.17□□□□□ -0.62
COMMD4-225ENST00000569245 FXYD6-FXYD2A0A087WZ82 144 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 A0A1B0GW64 132 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 TSC22D2O75157 780 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
COMMD4-225ENST00000569245 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-225ENST00000569245 SPINK9Q5DT21 86 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-225ENST00000569245 ZNF546Q86UE3 836 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 DLX4Q92988 240 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-225ENST00000569245 HIPK2Q9H2X6 1198 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-225ENST00000569245 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
COMMD4-225ENST00000569245 ANKRD34BA5PLL1 514 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 BOLA2-SMG1P6H3BVE0 249 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 SAP30O75446 220 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 IAPPP10997 89 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-225ENST00000569245 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 HINT2Q9BX68 163 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 HEYLQ9NQ87 328 aaPredicted RBP11.15□□□□□ -0.62
COMMD4-225ENST00000569245 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 U3KQ87 197 aa11.15□□□□□ -0.62
COMMD4-225ENST00000569245 IGLC7A0M8Q6 106 aa11.14□□□□□ -0.63
COMMD4-225ENST00000569245 INSL3P51460 131 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms