RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MALSU1Q96EH3 234 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 TMEM242Q9NWH2 141 aa14.57□□□□□ -0.08
SMPD3-211ENST00000568373 A6NNC1 897 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 C19orf84I3L1E1 186 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 GPR6P46095 362 aaPredicted RBP14.56□□□□□ -0.08
SMPD3-211ENST00000568373 ELOBQ15370 118 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 MRPL41Q8IXM3 137 aaKnown RBP14.56□□□□□ -0.08
SMPD3-211ENST00000568373 KMT2BQ9UMN6 2715 aaPredicted RBP14.56□□□□□ -0.08
SMPD3-211ENST00000568373 IGLC7A0M8Q6 106 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 HTR1DP28221 377 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 GCHFRP30047 84 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 ATP5G3P48201 142 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 LDLRAD2Q5SZI1 272 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 TPTE2P1Q5T6R2 138 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 OR2T6Q8NHC8 308 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 C2CD4CQ8TF44 421 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 ACY3Q96HD9 319 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 TXNDC17Q9BRA2 123 aa14.56□□□□□ -0.08
SMPD3-211ENST00000568373 FNDC4Q9H6D8 234 aaPredicted RBP14.56□□□□□ -0.08
SMPD3-211ENST00000568373 NDUFS7O75251 213 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 NPPCP23582 126 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 RPL27AP46776 148 aaKnown RBP14.55□□□□□ -0.08
SMPD3-211ENST00000568373 ADIRFQ15847 76 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 TNXAQ16473 311 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 FAM78BQ5VT40 261 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 ZNF343Q6P1L6 599 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 Q8WTZ3 238 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 RNF5Q99942 180 aa14.55□□□□□ -0.08
SMPD3-211ENST00000568373 SAV1Q9H4B6 383 aaPredicted RBP14.55□□□□□ -0.08
SMPD3-211ENST00000568373 METTL1Q9UBP6 276 aaKnown RBP14.55□□□□□ -0.08
SMPD3-211ENST00000568373 TSPAN9O75954 239 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 MT-CO2P00403 227 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
SMPD3-211ENST00000568373 PRTN3P24158 256 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 COMPP49747 757 aaPredicted RBP14.54□□□□□ -0.08
SMPD3-211ENST00000568373 PPP1R27Q86WC6 154 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 OR51G1Q8NGK1 321 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 DPM3Q9P2X0 92 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 FUT9Q9Y231 359 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 URGCP-MRPS24S4R325 110 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 F6UZH7 168 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 REG1AP05451 166 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 RPL23P62829 140 aaKnown RBP14.54□□□□□ -0.08
SMPD3-211ENST00000568373 MIR17HGQ75NE6 70 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 ZNF114Q8NC26 417 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 C19orf24Q9BVV8 132 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 CTDSP1Q9GZU7 261 aa14.54□□□□□ -0.08
SMPD3-211ENST00000568373 CLDN34H7C241 214 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 TIMM23O14925 209 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 CLN5O75503 358 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 FOXH1O75593 365 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 RND2P52198 227 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 GNB1P62873 340 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 ODF3BA8MYP8 253 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 CEACAM3P40198 252 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 EFNA4P52798 201 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 KLRD1Q13241 179 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 KIAA0141Q14154 515 aaPredicted RBP14.53□□□□□ -0.08
SMPD3-211ENST00000568373 PVRIGQ6DKI7 326 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 HCP5Q6MZN7 132 aa14.53□□□□□ -0.08
SMPD3-211ENST00000568373 VENTXO95231 258 aa14.52□□□□□ -0.09
SMPD3-211ENST00000568373 OR5G3P0C626 314 aa14.52□□□□□ -0.09
SMPD3-211ENST00000568373 C1orf122Q6ZSJ8 110 aa14.52□□□□□ -0.09
SMPD3-211ENST00000568373 FBXL15Q9H469 300 aa14.52□□□□□ -0.09
SMPD3-211ENST00000568373 YTHDF2Q9Y5A9 579 aaKnown RBP14.52□□□□□ -0.09
SMPD3-211ENST00000568373 CXCL1P09341 107 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 AREGP15514 252 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 C1QL4Q86Z23 238 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 KIR3DL3Q8N743 410 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 NPIPB3Q92617 1050 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 NDUFB4O95168 129 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 SSBP2P81877 361 aaPredicted RBP14.51□□□□□ -0.09
SMPD3-211ENST00000568373 THAP8Q8NA92 274 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 TECRQ9NZ01 308 aaKnown RBP14.51□□□□□ -0.09
SMPD3-211ENST00000568373 DOK5Q9P104 306 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 HILPDAQ9Y5L2 63 aa14.51□□□□□ -0.09
SMPD3-211ENST00000568373 ZNF462Q96JM2 2506 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 TGIF2-C20orf24A0A0A6YYL0 155 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 IGHV3-48P01763 117 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 ZFP36P26651 326 aaKnown RBP14.5□□□□□ -0.09
SMPD3-211ENST00000568373 ETFRF1Q6IPR1 90 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 TMEM37Q8WXS4 190 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 CFHR4Q92496 578 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 SSX3Q99909 188 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 MRPL36Q9P0J6 103 aaKnown RBP14.5□□□□□ -0.09
SMPD3-211ENST00000568373 PSMB11A5LHX3 300 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 TEX22C9J3V5 150 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 IGHV2-5P01817 119 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 CRYGCP07315 174 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 RPS10P46783 165 aaKnown RBP14.5□□□□□ -0.09
SMPD3-211ENST00000568373 MFAP2P55001 183 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 LHFPL4Q7Z7J7 247 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 OR1P1Q8NH06 330 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 MISP3Q96FF7 219 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 DERL1Q9BUN8 251 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 TMEM167BQ9NRX6 74 aa14.5□□□□□ -0.09
SMPD3-211ENST00000568373 AKAP6Q13023 2319 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 IGKV1D-37A0A075B6S9 117 aa14.49□□□□□ -0.09
SMPD3-211ENST00000568373 TCRBV4S1A1TA0A5B7 111 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms