RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RP1P56715 2156 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 GLO1Q04760 184 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 ACTBL2Q562R1 376 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 GLT8D1Q68CQ7 371 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 FAM231DQ6ZW35 169 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 DCXRQ7Z4W1 244 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SPICQ8N5J4 248 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF676Q8N7Q3 588 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF563Q8TA94 476 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SPACA5Q96QH8 159 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 TBX5Q99593 518 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 PRSS27Q9BQR3 290 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SLC25A21Q9BQT8 299 aaPredicted RBP2.48□□□□□ -2.01
LINC00560-201ENST00000564593 SEC22CQ9BRL7 303 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 PRORYQ9H606 182 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 COMMD9Q9P000 198 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 GLS2Q9UI32 602 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 ANXA10Q9UJ72 324 aa2.48□□□□□ -2.01
LINC00560-201ENST00000564593 CEP290O15078 2479 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SPTBP11277 2137 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 DYSFO75923 2080 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TRAV36DV7A0A075B6V5 113 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 MEIKINA0A087WXM9 373 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PIGBOS1A0A0B4J2F0 54 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SPTY2D1-AS1A0A0U1RR47 76 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 FAM183AA6NL82 134 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 C4orf51C9J302 202 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 K7EQS6 105 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PLPP3O14495 311 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 GPR171O14626 319 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PLA2G10O15496 165 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SGCEO43556 437 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 ENSAO43768 121 aaKnown RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 NDUFB6O95139 128 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CRYZL1O95825 349 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CYB5AP00167 134 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 NRASP01111 189 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 HRASP01112 189 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 KRASP01116 189 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 IGHV1-46P01743 117 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 AKAIN1P0CW23 69 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SULT1A3P0DMM9 295 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SULT1A4P0DMN0 295 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SPI1P17947 270 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 POLR2HP52434 150 aaKnown RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 NKX2-5P52952 324 aaPredicted RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TSPAN5P62079 268 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 EIF5AP63241 154 aaKnown RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 BAMBIQ13145 260 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 EIF3IQ13347 325 aaKnown RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 HTR4Q13639 388 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TRMT12Q53H54 448 aaKnown RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CLLU1Q5K131 121 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CLVS2Q5SYC1 327 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CLEC18BQ6UXF7 455 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM91Q6ZNR0 172 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 BOD1L2Q8IYS8 172 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 C9orf62Q8N4C0 152 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF680Q8NEM1 530 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TSTD1Q8NFU3 115 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 OR2T35Q8NGX2 323 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 OR4K13Q8NH42 304 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PFN4Q8NHR9 129 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 RPS4Y2Q8TD47 263 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SLC37A2Q8TED4 501 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 DOK4Q8TEW6 326 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 TNFAIP8L1Q8WVP5 186 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 KLK6Q92876 244 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 YIPF5Q969M3 257 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 ZMYND19Q96E35 227 aaPredicted RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PGLYRP3Q96LB9 341 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 PRRT1Q99946 306 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF436Q9C0F3 470 aaPredicted RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 AICDAQ9GZX7 198 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 FBXL3Q9UKT7 428 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 KLF13Q9Y2Y9 288 aaPredicted RBP2.47□□□□□ -2.01
LINC00560-201ENST00000564593 IER3IP1Q9Y5U9 82 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 CACNA1CQ13936 2221 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 SPAG17Q6Q759 2223 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 FREM3P0C091 2139 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 HTTP42858 3142 aa2.47□□□□□ -2.01
LINC00560-201ENST00000564593 BRWD1Q9NSI6 2320 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 SEC16AO15027 2179 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 EML5Q05BV3 1969 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 KIAA1549Q9HCM3 1950 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 BAHCC1Q9P281 2608 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 A0A1B0GX78 115 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 LINC00862A6NCI5 91 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 GGT3PA6NGU5 568 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 TMEM210A6NLX4 147 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 HMSDA8MTL9 139 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 DISC1C4P0D8 188 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 F5H5P2 479 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 FABP7O15540 132 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 OR2A4O95047 310 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 IGHMP01871 453 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 APOC1P02654 83 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 STATHP02808 62 aa2.46□□□□□ -2.02
LINC00560-201ENST00000564593 UBBP0CG47 229 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms