RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 TMEM204Q9BSN7 226 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 LINC00574Q9H8X3 128 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 SMCO4Q9NRQ5 59 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 MSRB1Q9NZV6 116 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 ZFHX4Q86UP3 3567 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 ABCA4P78363 2273 aa4.33□□□□□ -1.72
SH3GL3-206ENST00000564054 FRYQ5TBA9 3013 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SPTA1P02549 2419 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SPTBN1Q01082 2364 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 COL6A6A6NMZ7 2263 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 UBE2L5PA0A1B0GUS4 154 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 A0A1B0GV50 99 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 MED19A0JLT2 244 aaPredicted RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 MEX3AA1L020 520 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SHISA9B4DS77 424 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 E7EQL1 145 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 M0R036 132 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CCL21O00585 134 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CHEK1O14757 476 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 NUPL2O15504 423 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CYB5BO43169 146 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ZG16O60844 167 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 MPDU1O75352 247 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 IFNA10P01566 189 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 APOA2P02652 100 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 HSPB1P04792 205 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SRD5A1P18405 259 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 FGF7P21781 194 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 BRWD1-AS2P59051 145 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 OR2B8PP59922 312 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 RPL31P62899 125 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 RUNX1Q01196 453 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 EFNB3Q15768 340 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ACOT6Q3I5F7 207 aaPredicted RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 PRR30Q53SZ7 412 aaPredicted RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 RPL39P5Q59GN2 51 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CT45A1Q5HYN5 189 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ZNF506Q5JVG8 444 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM201AQ5SY85 155 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SLC25A48Q6ZT89 311 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 HAPLN4Q86UW8 402 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM216BQ8N7L0 139 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CT45A3Q8NHU0 189 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 IGFBPL1Q8WX77 278 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 CCL17Q92583 94 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ZNF714Q96N38 554 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 GGACTQ9BVM4 153 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SIRPDQ9H106 197 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 IFI27L2Q9H2X8 130 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 RPS10P5Q9NQ39 176 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 TMEM106BQ9NUM4 274 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 FKBP11Q9NYL4 201 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 RPUSD1Q9UJJ7 312 aaKnown RBP4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 PRNDQ9UKY0 176 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 MGAQ8IWI9 3026 aa4.32□□□□□ -1.72
SH3GL3-206ENST00000564054 SETXQ7Z333 2677 aaKnown RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 CEP295Q9C0D2 2601 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 SAA2-SAA4A0A096LPE2 208 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 IGHV1-69-2A0A0G2JMI3 117 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 CTXND1A0A1B0GTU2 59 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 LOC105371267A0A1B0GV96 52 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM74A7A6NL05 159 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 NDUFB8O95169 186 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 OR9G9P0C7N8 305 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 SAA2P0DJI9 122 aaPredicted RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 OR13C7P0DN81 318 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 IL3RAP26951 378 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 HOXA1P49639 335 aaPredicted RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 GNG10P50151 68 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 HSPE1P61604 102 aaKnown RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 ARL16Q0P5N6 197 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 RAB31Q13636 194 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 RHEBQ15382 184 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 POU2AF1Q16633 256 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 HAGHQ16775 308 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM74A3Q4VXF1 159 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 PDLIM3Q53GG5 364 aaPredicted RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 AKIRIN2Q53H80 203 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 FAM71F2Q6NXP2 309 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 SPSB3Q6PJ21 355 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 HEPN1Q6WQI6 88 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 SSX9Q7RTT3 188 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 C15orf54Q8N8G6 183 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 C8orf31Q8N9H6 132 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 ZNF439Q8NDP4 499 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 OR10G4Q8NGN3 311 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 H1FXQ92522 213 aaKnown RBP4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 LHX4Q969G2 390 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 P2RX4Q99571 388 aa4.31□□□□□ -1.72
SH3GL3-206ENST00000564054 RSG1Q9BU20 258 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms