RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 VAMP2P63027 116 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 ERHP84090 104 aaKnown RBP10.18□□□□□ -0.78
SPG7-209ENST00000564047 C9orf152Q5JTZ5 239 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 SLC35E3Q7Z769 313 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 OR10W1Q8NGF6 305 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 OR1S2Q8NGQ3 325 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 SGMS2Q8NHU3 365 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 TMEM68Q96MH6 324 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
SPG7-209ENST00000564047 PARP11Q9NR21 331 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 FBXO7Q9Y3I1 522 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 WSB1Q9Y6I7 421 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 PKD1L1Q8TDX9 2849 aa10.18□□□□□ -0.78
SPG7-209ENST00000564047 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 FAM181BA6NEQ2 426 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 LINC01548A6NM66 108 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 ATP6V0E1O15342 81 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 TMEM50AO95807 157 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 SEC11BP0C7V7 166 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 RPL23AP62750 156 aaKnown RBP10.17□□□□□ -0.78
SPG7-209ENST00000564047 WT1-ASQ06250 92 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 Q6ZS46 218 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 Q8N2B8 174 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 OR2C3Q8N628 320 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 ABHD5Q8WTS1 349 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 GINS3Q9BRX5 216 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 FAM103A1Q9BTL3 118 aaKnown RBP10.17□□□□□ -0.78
SPG7-209ENST00000564047 SLC25A31Q9H0C2 315 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
SPG7-209ENST00000564047 TENM1Q9UKZ4 2725 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 AP4M1O00189 453 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 OR13C7P0DN81 318 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 AREGP15514 252 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 ATP5IP56385 69 aaPredicted RBP10.16□□□□□ -0.78
SPG7-209ENST00000564047 RPP30P78346 268 aaKnown RBP10.16□□□□□ -0.78
SPG7-209ENST00000564047 TMEM267Q0VDI3 215 aaPredicted RBP10.16□□□□□ -0.78
SPG7-209ENST00000564047 BSXQ3C1V8 233 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 AKIRIN2Q53H80 203 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 ASPHD1Q5U4P2 390 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 ZNF702PQ9H963 129 aa10.16□□□□□ -0.78
SPG7-209ENST00000564047 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 ZNF705EA8MWA4 302 aaPredicted RBP10.15□□□□□ -0.78
SPG7-209ENST00000564047 TSPAN9O75954 239 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 CRYBA1P05813 215 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 CRYGCP07315 174 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 CTRB1P17538 263 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 SNCAP37840 140 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 RAB5CP51148 216 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 BAXQ07812 192 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 CTRB2Q6GPI1 263 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 UNQ5815/PRO19632Q6UWF5 114 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 TTC9CQ8N5M4 171 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 COMMD1Q8N668 190 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 ZNF114Q8NC26 417 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 SLC24A4Q8NFF2 622 aa10.15□□□□□ -0.78
SPG7-209ENST00000564047 LYRM2Q9NU23 88 aaPredicted RBP10.15□□□□□ -0.78
SPG7-209ENST00000564047 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
SPG7-209ENST00000564047 TRAV41A0A0B4J266 112 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 IFNA10P01566 189 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 APELAP0DMC3 54 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 RNASE2P10153 161 aaKnown RBP10.14□□□□□ -0.79
SPG7-209ENST00000564047 SPP1P10451 314 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 NPY1RP25929 384 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 CAV2P51636 162 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 SUB1P53999 127 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPG7-209ENST00000564047 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
SPG7-209ENST00000564047 EWSR1Q01844 656 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPG7-209ENST00000564047 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 C2orf83Q53S99 150 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 C19orf54Q5BKX5 351 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 SPANXN5Q5MJ07 72 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 BTNL8Q6UX41 500 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 Q6ZSV7 163 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 BPIFCQ8NFQ6 507 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 OR1L6Q8NGR2 347 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 FAM110DQ8TAY7 271 aaPredicted RBP10.14□□□□□ -0.79
SPG7-209ENST00000564047 OR4C12Q96R67 309 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 P2RX4Q99571 388 aa10.14□□□□□ -0.79
SPG7-209ENST00000564047 TMEM218A2RU14 115 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 C15orf62A8K5M9 175 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 G3V318 75 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 H3BP45 60 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 FBXO24O75426 580 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 SCAF4O95104 1147 aaKnown RBP10.13□□□□□ -0.79
SPG7-209ENST00000564047 REG1AP05451 166 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 RAB11AP62491 216 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 ZNF266Q14584 549 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
SPG7-209ENST00000564047 C10orf91Q5T1B1 145 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 TMEM252Q8N6L7 170 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 OR1P1Q8NH06 330 aa10.13□□□□□ -0.79
SPG7-209ENST00000564047 OR2T6Q8NHC8 308 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms