RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 SCGB2B2Q4G0G5 96 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 FAAP20Q6NZ36 180 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 STEAP1BQ6NZ63 245 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 ZFAND1Q8TCF1 268 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 PINX1Q96BK5 328 aaKnown RBP10.05□□□□□ -0.8
USB1-205ENST00000561743 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 TXN2Q99757 166 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 NXF2Q9GZY0 626 aaKnown RBP10.05□□□□□ -0.8
USB1-205ENST00000561743 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 UBQLN2Q9UHD9 624 aa10.05□□□□□ -0.8
USB1-205ENST00000561743 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 UCP1P25874 307 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 SSBP1Q04837 148 aaKnown RBP10.04□□□□□ -0.8
USB1-205ENST00000561743 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 LAMTOR1Q6IAA8 161 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 CCDC71LQ8N9Z2 235 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 SMIM4Q8WVI0 70 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 OVOL2Q9BRP0 275 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
USB1-205ENST00000561743 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 IGHV7-4-1A0A0J9YVY3 117 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 GNG7O60262 68 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 ATG12O94817 140 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 CTSDP07339 412 aaPredicted RBP10.03□□□□□ -0.8
USB1-205ENST00000561743 MRPS10P82664 201 aaKnown RBP10.03□□□□□ -0.8
USB1-205ENST00000561743 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 CLVS1Q8IUQ0 354 aaPredicted RBP10.03□□□□□ -0.8
USB1-205ENST00000561743 SLC35G3Q8N808 338 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 DYNC2LI1Q8TCX1 351 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 RNF2Q99496 336 aa10.03□□□□□ -0.8
USB1-205ENST00000561743 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 OR4C46A6NHA9 309 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 CHEK1O14757 476 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 B3GALNT1O75752 331 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 YIF1AO95070 293 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 IFNA17P01571 189 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 SNCAP37840 140 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 ETV6P41212 452 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 MEF2DQ14814 521 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 RAB2BQ8WUD1 216 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
USB1-205ENST00000561743 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 RHPN1-AS1Q9BWJ2 59 aa10.02□□□□□ -0.81
USB1-205ENST00000561743 CCDC59Q9P031 241 aaKnown RBP10.02□□□□□ -0.81
USB1-205ENST00000561743 CTDSPLO15194 276 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 CDS2O95674 445 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 RNASE2P10153 161 aaKnown RBP10.01□□□□□ -0.81
USB1-205ENST00000561743 TMBIM6P55061 237 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 IL18Q14116 193 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 Q6ZRM9 215 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 DUSP18Q8NEJ0 188 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 OR4C16Q8NGL9 310 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 LHFPL5Q8TAF8 219 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 RRNAD1Q96FB5 475 aaKnown RBP10.01□□□□□ -0.81
USB1-205ENST00000561743 DIRAS2Q96HU8 199 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 TMEM222Q9H0R3 208 aa10.01□□□□□ -0.81
USB1-205ENST00000561743 C14orf166Q9Y224 244 aaKnown RBP10.01□□□□□ -0.81
USB1-205ENST00000561743 IGHV3OR16-13A0A075B7E8 117 aa10□□□□□ -0.81
USB1-205ENST00000561743 TRAV14DV4A0A0A6YYC5 116 aa10□□□□□ -0.81
USB1-205ENST00000561743 IGHV3-74A0A0B4J1X5 117 aa10□□□□□ -0.81
USB1-205ENST00000561743 DISC1C4P0D8 188 aa10□□□□□ -0.81
USB1-205ENST00000561743 CORTO00230 105 aa10□□□□□ -0.81
USB1-205ENST00000561743 AKAIN1P0CW23 69 aa10□□□□□ -0.81
USB1-205ENST00000561743 NPBWR1P48145 328 aa10□□□□□ -0.81
USB1-205ENST00000561743 HOXA1P49639 335 aaPredicted RBP10□□□□□ -0.81
USB1-205ENST00000561743 APOC4P55056 127 aa10□□□□□ -0.81
USB1-205ENST00000561743 SURF2Q15527 256 aaPredicted RBP10□□□□□ -0.81
USB1-205ENST00000561743 DEFB135Q30KP9 77 aa10□□□□□ -0.81
USB1-205ENST00000561743 BSXQ3C1V8 233 aa10□□□□□ -0.81
USB1-205ENST00000561743 AARDQ4LEZ3 155 aa10□□□□□ -0.81
USB1-205ENST00000561743 FAM90A2PQ658T7 463 aa10□□□□□ -0.81
USB1-205ENST00000561743 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
USB1-205ENST00000561743 RNASE11Q8TAA1 199 aaKnown RBP10□□□□□ -0.81
USB1-205ENST00000561743 BCL7BQ9BQE9 202 aa10□□□□□ -0.81
USB1-205ENST00000561743 NAA60Q9H7X0 242 aa10□□□□□ -0.81
USB1-205ENST00000561743 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
USB1-205ENST00000561743 MRPL36Q9P0J6 103 aaKnown RBP10□□□□□ -0.81
USB1-205ENST00000561743 HYDINQ4G0P3 5121 aa10□□□□□ -0.81
USB1-205ENST00000561743 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.81
USB1-205ENST00000561743 ZNF600Q6ZNG1 722 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 Q6ZWC4 215 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 WFDC3Q8IUB2 231 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 APRG1Q8IVJ8 170 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 FAM219AQ8IW50 185 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 SLIRPQ9GZT3 109 aaKnown RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 C6orf62Q9GZU0 229 aaPredicted RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 FNDC4Q9H6D8 234 aaPredicted RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 ENY2Q9NPA8 101 aa9.99□□□□□ -0.81
USB1-205ENST00000561743 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
USB1-205ENST00000561743 RABL2BQ9UNT1 228 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms