RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 OR5B12Q96R08 314 aa7.82□□□□□ -1.16
USP3-216ENST00000559873 ATP6V0BQ99437 205 aa7.82□□□□□ -1.16
USP3-216ENST00000559873 ALG5Q9Y673 324 aa7.82□□□□□ -1.16
USP3-216ENST00000559873 MPTX1A8MV57 137 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 I3L521 148 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 RNASE2P10153 161 aaKnown RBP7.81□□□□□ -1.16
USP3-216ENST00000559873 ZP3P21754 424 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 OPRK1P41145 380 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 RAB11AP62491 216 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 ID3Q02535 119 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 ZNF616Q08AN1 781 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 KIAA0141Q14154 515 aaPredicted RBP7.81□□□□□ -1.16
USP3-216ENST00000559873 C2orf83Q53S99 150 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 PRR31Q5SQ13 230 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 HIST2H2BDQ6DRA6 164 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 ETFRF1Q6IPR1 90 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 ZNF343Q6P1L6 599 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 OR11H1Q8NG94 326 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 OR1N2Q8NGR9 330 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 RNASEH2CQ8TDP1 164 aaKnown RBP7.81□□□□□ -1.16
USP3-216ENST00000559873 OR10C1Q96KK4 312 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 C21orf62Q9NYP8 219 aa7.81□□□□□ -1.16
USP3-216ENST00000559873 PEF1Q9UBV8 284 aaKnown RBP7.81□□□□□ -1.16
USP3-216ENST00000559873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.8□□□□□ -1.16
USP3-216ENST00000559873 L7N2F9 121 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 CCL24O00175 119 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 SSSCA1O60232 199 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 SCAF4O95104 1147 aaKnown RBP7.8□□□□□ -1.16
USP3-216ENST00000559873 NDUFB8O95169 186 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 TSPAN15O95858 294 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 HSPB1P04792 205 aaKnown RBP7.8□□□□□ -1.16
USP3-216ENST00000559873 PET100P0DJ07 73 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 IAPPP10997 89 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 S100A10P60903 97 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 VAMP2P63027 116 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 DEFA5Q01523 94 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 FHL3Q13643 280 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 DEFB136Q30KP8 78 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 BSXQ3C1V8 233 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 C18orf65Q6ZTR6 163 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 PINX1Q96BK5 328 aaKnown RBP7.8□□□□□ -1.16
USP3-216ENST00000559873 RAB40CQ96S21 281 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 NMES1Q9C002 83 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 MAGT1Q9H0U3 335 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 MED28Q9H204 178 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 MGAT4CQ9UBM8 478 aa7.8□□□□□ -1.16
USP3-216ENST00000559873 MGAM2Q2M2H8 2515 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 IGHV4OR15-8A0A075B7B6 117 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 A0A087WW49 117 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 ANKRD34BA5PLL1 514 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 MFSD2BA6NFX1 497 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 MT-CO2P00403 227 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 IFNA4P05014 189 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 SLC25A4P12235 298 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 CD33P20138 364 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 ARL3P36405 182 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 NPBWR1P48145 328 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 TAS2R30P59541 319 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 POLR2GP62487 172 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP3-216ENST00000559873 RPEL1Q2QD12 228 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 Q56UQ5 140 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 PVRIGQ6DKI7 326 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 ZNF502Q8TBZ5 544 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 SCARB1Q8WTV0 552 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 ASB13Q8WXK3 278 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 DCUN1D4Q92564 292 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 BSCL2Q96G97 398 aaPredicted RBP7.79□□□□□ -1.16
USP3-216ENST00000559873 RAX2Q96IS3 184 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 TXN2Q99757 166 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 GPR61Q9BZJ8 451 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 PAIP2BQ9ULR5 123 aaKnown RBP7.79□□□□□ -1.16
USP3-216ENST00000559873 STRAPQ9Y3F4 350 aaKnown RBP7.79□□□□□ -1.16
USP3-216ENST00000559873 LSM5Q9Y4Y9 91 aaKnown RBP7.79□□□□□ -1.16
USP3-216ENST00000559873 DMRT1Q9Y5R6 373 aa7.79□□□□□ -1.16
USP3-216ENST00000559873 I3L2K1 104 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 K7EIM0 57 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 GNG7O60262 68 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 TSC22D2O75157 780 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 GGCTO75223 188 aaKnown RBP7.78□□□□□ -1.16
USP3-216ENST00000559873 MBPP02686 304 aaPredicted RBP7.78□□□□□ -1.16
USP3-216ENST00000559873 RLN2P04090 185 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 HOXD3P31249 432 aaPredicted RBP7.78□□□□□ -1.16
USP3-216ENST00000559873 FCGR2BP31994 310 aaPredicted RBP7.78□□□□□ -1.16
USP3-216ENST00000559873 GPR183P32249 361 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 MFAP2P55001 183 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 MFAP4P55083 255 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 ACSM6Q6P461 480 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 SPSB3Q6PJ21 355 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 CLEC19AQ6UXS0 136 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 ETV3LQ6ZN32 361 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 UBAC2Q8NBM4 344 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 SLC35E1Q96K37 410 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 SMIM8Q96KF7 97 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 DUX3Q96PT4 197 aa7.78□□□□□ -1.16
USP3-216ENST00000559873 MCRIP2Q9BUT9 160 aaKnown RBP7.78□□□□□ -1.16
USP3-216ENST00000559873 PSENENQ9NZ42 101 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms