RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GNG7O60262 68 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 YIF1AO95070 293 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 MT-CO2P00403 227 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 IGKV1-5P01602 117 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 CSN3P07498 182 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 FOLR2P14207 255 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 CBLN1P23435 193 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 VAMP1P23763 118 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 BMI1P35226 326 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 OPRK1P41145 380 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 HTR2BP41595 481 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 NPBWR1P48145 328 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 MFAP4P55083 255 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ELLP55199 621 aaPredicted RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 SPCS3P61009 180 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 KLF9Q13886 244 aaPredicted RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 RBMS2Q15434 407 aaKnown RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 CD300EQ496F6 205 aaPredicted RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 TMEM268Q5VZI3 342 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ETFRF1Q6IPR1 90 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 IL34Q6ZMJ4 242 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 RBPMS2Q6ZRY4 209 aaKnown RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 C19orf35Q6ZS72 473 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 SLC16A13Q7RTY0 426 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 CCDC190Q86UF4 302 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 HAPLN4Q86UW8 402 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ZNF114Q8NC26 417 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 DUSP18Q8NEJ0 188 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 OR52E5Q8NH55 327 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ZNF502Q8TBZ5 544 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 SCARB1Q8WTV0 552 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 IL22RA2Q969J5 263 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 CITED4Q96RK1 184 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TXN2Q99757 166 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 C20orf24Q9BUV8 137 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TUBA4BQ9H853 241 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 ZMAT4Q9H898 229 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 HEYLQ9NQ87 328 aaPredicted RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 DAZ1Q9NQZ3 744 aaKnown RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 ZC4H2Q9NQZ6 224 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 MRPL27Q9P0M9 148 aaKnown RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 LSM4Q9Y4Z0 139 aaKnown RBP3.33□□□□□ -1.88
SNX1-205ENST00000559339 DMRT1Q9Y5R6 373 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TMEM56-RWDD3S4R434 201 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 V9GYH0 126 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 SORL1Q92673 2214 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TGP01266 2768 aa3.33□□□□□ -1.88
SNX1-205ENST00000559339 TRAV14DV4A0A0A6YYC5 116 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 IGHV3-21A0A0B4J1V1 117 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 A0A1B0GU03 582 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 DUXBA0A1W2PPF3 345 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 TMEM213A2RRL7 107 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 DBX1A6NMT0 343 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 C15orf62A8K5M9 175 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 CEBPZOSA8MTT3 80 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 I3L2K1 104 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 K7EIM0 57 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 K7EMT4 169 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 CD5P06127 495 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 FRMD6-AS1P0C7T7 363 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 P0C879 139 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 SULT1A3P0DMM9 295 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 SULT1A4P0DMN0 295 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 IGHV4-30-4P0DP06 118 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 CCR6P51684 374 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 ATP5IP56385 69 aaPredicted RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 CD81P60033 236 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 RPP30P78346 268 aaKnown RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 SMCO1Q147U7 214 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 ZNF79Q15937 498 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 GUCA2BQ16661 112 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 IZUMO4Q1ZYL8 232 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 DEFB114Q30KQ6 69 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 CNPY1Q3B7I2 92 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 SPINK9Q5DT21 86 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 LAMTOR1Q6IAA8 161 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 SELENOHQ8IZQ5 122 aaKnown RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 CENPSQ8N2Z9 138 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 UXS1Q8NBZ7 420 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 SLC24A4Q8NFF2 622 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 RNASEH2CQ8TDP1 164 aaKnown RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 TRIM63Q969Q1 353 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 GINS3Q9BRX5 216 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 ZNF436Q9C0F3 470 aaPredicted RBP3.32□□□□□ -1.88
SNX1-205ENST00000559339 SRRQ9GZT4 340 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 CACNG5Q9UF02 275 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 U3KQ87 197 aa3.32□□□□□ -1.88
SNX1-205ENST00000559339 TRAV30A0A087WSZ9 112 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 TRAV25A0A0B4J276 109 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 A6NHS1 94 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 A8MZ25 164 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 MED6O75586 246 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 SCAF4O95104 1147 aaKnown RBP3.31□□□□□ -1.88
SNX1-205ENST00000559339 IFNA10P01566 189 aa3.31□□□□□ -1.88
SNX1-205ENST00000559339 IFNA21P01568 189 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms