RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
LRRC28-210ENST00000558879 MARCH1Q8TCQ1 289 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 MISP3Q96FF7 219 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 OR10C1Q96KK4 312 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 TXN2Q99757 166 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 RYR2Q92736 4967 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 TENM2Q9NT68 2774 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 ST8SIA3O43173 380 aa12.68□□□□□ -0.38
LRRC28-210ENST00000558879 B3GALNT1O75752 331 aa12.68□□□□□ -0.38
LRRC28-210ENST00000558879 MFAP4P55083 255 aa12.68□□□□□ -0.38
LRRC28-210ENST00000558879 RELQ04864 619 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-210ENST00000558879 MEF2DQ14814 521 aa12.68□□□□□ -0.38
LRRC28-210ENST00000558879 SURF2Q15527 256 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-210ENST00000558879 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
LRRC28-210ENST00000558879 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-210ENST00000558879 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
LRRC28-210ENST00000558879 IGHV3OR16-8A0A075B7F1 116 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 NUPL2O15504 423 aaKnown RBP12.67□□□□□ -0.38
LRRC28-210ENST00000558879 ATG12O94817 140 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 ERHP84090 104 aaKnown RBP12.67□□□□□ -0.38
LRRC28-210ENST00000558879 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 SP6Q3SY56 376 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 AARDQ4LEZ3 155 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 SPINK9Q5DT21 86 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 OR4C16Q8NGL9 310 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 C20orf24Q9BUV8 137 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
LRRC28-210ENST00000558879 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
LRRC28-210ENST00000558879 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
LRRC28-210ENST00000558879 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 IL18Q14116 193 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 TRIM16LQ309B1 348 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 SLC35G3Q8N808 338 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 RTBDNQ9BSG5 229 aaPredicted RBP12.66□□□□□ -0.38
LRRC28-210ENST00000558879 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
LRRC28-210ENST00000558879 LOC102724200A0A096LPH7 203 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-210ENST00000558879 IGHV7-4-1A0A0J9YVY3 117 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 GSTZ1O43708 216 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-210ENST00000558879 GNG7O60262 68 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 CDS2O95674 445 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 IGHV3-48P01763 117 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 OR5AC1P0C628 307 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 RNASE2P10153 161 aaKnown RBP12.65□□□□□ -0.38
LRRC28-210ENST00000558879 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 FAM219AQ8IW50 185 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 PINX1Q96BK5 328 aaKnown RBP12.65□□□□□ -0.38
LRRC28-210ENST00000558879 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 GPR132Q9UNW8 380 aa12.65□□□□□ -0.38
LRRC28-210ENST00000558879 C14orf166Q9Y224 244 aaKnown RBP12.65□□□□□ -0.38
LRRC28-210ENST00000558879 LCE6AA0A183 80 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 ANKRD20A5PA0PJZ0 165 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 DISC1C4P0D8 188 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 H3BMQ9 156 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 CORTO00230 105 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 CHEK1O14757 476 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 LAMTOR1Q6IAA8 161 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 Q6ZRM9 215 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 PDCD10Q9BUL8 212 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
LRRC28-210ENST00000558879 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 IFNA17P01571 189 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 SNCAP37840 140 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 RBPMSQ93062 196 aaKnown RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 RRNAD1Q96FB5 475 aaKnown RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 RNF2Q99496 336 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 PRRT1Q99946 306 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 SOSTQ9BQB4 213 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 FNDC4Q9H6D8 234 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-210ENST00000558879 UBQLN2Q9UHD9 624 aa12.63□□□□□ -0.39
LRRC28-210ENST00000558879 TEX13DA0A0J9YY54 714 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-210ENST00000558879 NPBWR1P48145 328 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 OR51S1Q8NGJ8 323 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 OVOL2Q9BRP0 275 aa12.62□□□□□ -0.39
LRRC28-210ENST00000558879 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
LRRC28-210ENST00000558879 ETV6P41212 452 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 DHODHQ02127 395 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 ZNF600Q6ZNG1 722 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 WFDC3Q8IUB2 231 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
LRRC28-210ENST00000558879 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
LRRC28-210ENST00000558879 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 GALNT14Q96FL9 552 aa12.61□□□□□ -0.39
LRRC28-210ENST00000558879 VSIRQ9H7M9 311 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms