RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CCDC124Q96CT7 223 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 SMIM19Q96E16 107 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 LINC00526Q96FQ7 95 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 SERPINI1Q99574 410 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 DERL1Q9BUN8 251 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TLNRD1Q9H1K6 362 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 UCK1Q9HA47 277 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 EFCAB1Q9HAE3 211 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 XPNPEP1Q9NQW7 623 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CDC42SE1Q9NRR8 79 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 IMP3Q9NV31 184 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 UBAP1Q9NZ09 502 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 DKKL1Q9UK85 242 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CACNA1AO00555 2505 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 JMJD1CQ15652 2540 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FAM208BQ5VWN6 2430 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FAT2Q9NYQ8 4349 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 KCPQ6ZWJ8 1503 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 MAP3K19Q56UN5 1328 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 RAD50Q92878 1312 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 DCHS2Q6V1P9 2916 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 N4BP2Q86UW6 1770 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CSMD3Q7Z407 3707 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 EIF4G1Q04637 1599 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 ESPL1Q14674 2120 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TRBV20OR9-2A0A075B6H5 130 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TRAV12-1A0A0B4J245 112 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CCDC160A6NGH7 325 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 GOLGA6L10A6NI86 522 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 FABP5P3A8MUU1 101 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF736B4DX44 427 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 F8VZ95 297 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 NCR3O14931 201 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 HPGDSO60760 199 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 HYPMO75409 117 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR2J2O76002 312 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 KRT75O95678 551 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TCL1BO95988 128 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 DNAL4O96015 105 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 APOA1P02647 267 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 S100A9P06702 114 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 IL3P08700 152 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 HTR1AP08908 422 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 COX5BP10606 129 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 MGST1P10620 155 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 MIFP14174 115 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 RPS12P25398 132 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 RPL12P30050 165 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 BLVRAP53004 296 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 AP1S1P61966 158 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 AKR1C1Q04828 323 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 MLLT11Q13015 90 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CLEC12BQ2HXU8 276 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 C12orf74Q32Q52 190 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 IBA57Q5T440 356 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 C1orf195Q5TG92 126 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 FAM78BQ5VT40 261 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 LPCAT4Q643R3 524 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CLEC6AQ6EIG7 209 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TEX261Q6UWH6 196 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 GLIPR1L1Q6UWM5 242 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 SOSTDC1Q6X4U4 206 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 HIST2H3AQ71DI3 136 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 RPS19BP1Q86WX3 136 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CRLF3Q8IUI8 442 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 CLECL1Q8IZS7 167 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM86BQ8N661 226 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 DEFB125Q8N687 156 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 ATP6V1C2Q8NEY4 427 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 GPR32P1Q8NGA4 272 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR11H6Q8NGC7 330 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR51D1Q8NGF3 324 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR5A1Q8NGJ0 315 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR8D4Q8NGM9 314 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 WFDC5Q8TCV5 224 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 RASSF5Q8WWW0 418 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 C11orf40Q8WZ69 217 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM106AQ96A25 262 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 ADAT3Q96EY9 351 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 IMP4Q96G21 291 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 PACRGQ96M98 296 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 KCTD7Q96MP8 289 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM147Q9BVK8 224 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 WDR61Q9GZS3 305 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 HDHD2Q9H0R4 259 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR52A5Q9H2C5 316 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR51I1Q9H343 314 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 C11orf68Q9H3H3 251 aaKnown RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 MAP1LC3AQ9H492 121 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 SPACA1Q9HBV2 294 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 XAGE1AQ9HD64 81 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 SPANXB1Q9NS25 103 aaPredicted RBP-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 ACER3Q9NUN7 267 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 PLEKHJ1Q9NW61 149 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 PLAC8Q9NZF1 115 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 OR5AC2Q9NZP5 309 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 KLK9Q9UKQ9 250 aa-0.14□□□□□ -2.43
FOXN3-216ENST00000557496 EPDR1Q9UM22 224 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms