RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 ACTR3BQ9P1U1 418 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 ING4Q9UNL4 249 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 BAIAP2Q9UQB8 552 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV3OR16-8A0A075B7F1 116 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 METTL15A6NJ78 407 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF729A6NN14 1252 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 PPP5D1E7EU14 171 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 C15orf65H3BRN8 121 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 J3QRK9 145 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 AIPO00170 330 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 FGF16O43320 207 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CCDC22O60826 627 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 RAMP3O60896 148 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 FKBP6O75344 327 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 GATBO75879 557 aaKnown RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR7C1O76099 320 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 S1PR2O95136 353 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CYB5AP00167 134 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CA2P00918 260 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 NPPAP01160 153 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 IGHG4P01861 327 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 HBZP02008 142 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 APOC1P02654 83 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 LGALS1P09382 135 aaKnown RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 GIPP09681 153 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CD3GP09693 182 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CRISP2P16562 243 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 MAPK3P27361 379 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 PSMB8P28062 276 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CD34P28906 385 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 RBP2P50120 134 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 RAB9AP51151 201 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CRISP1P54107 249 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 PRRX1P54821 245 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 ACTBP60709 375 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SELENOTP62341 195 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CDK5Q00535 292 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 MEF2CQ06413 473 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 PJVKQ0ZLH3 352 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SLAQ13239 276 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 INSL4Q14641 139 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SNCBQ16143 134 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 GUCA2BQ16661 112 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CT45A1Q5HYN5 189 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 C10orf55Q5SWW7 151 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 AADACL4Q5VUY2 407 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 Q5W150 140 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR10K2Q6IF99 312 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 UNQ5815/PRO19632Q6UWF5 114 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 LHFPL3Q86UP9 236 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 DHFR2Q86XF0 187 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 TGIF2LXQ8IUE1 241 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SGPP2Q8IWX5 399 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 DRAXINQ8NBI3 349 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 TMEM104Q8NE00 496 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 DUSP18Q8NEJ0 188 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 LFNGQ8NES3 379 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR8H1Q8NGG4 311 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR51S1Q8NGJ8 323 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR2G2Q8NGZ5 317 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 OR2T10Q8NGZ9 312 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CT45A3Q8NHU0 189 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 RTN4IP1Q8WWV3 396 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 ASB17Q8WXJ9 295 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 MAFIPQ8WZ33 124 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CMTM5Q96DZ9 223 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 ABHD14BQ96IU4 210 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 FAM210BQ96KR6 192 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 C4orf36Q96KX1 117 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 GPER1Q99527 375 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SIKE1Q9BRV8 207 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 HDHD3Q9BSH5 251 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 THTPAQ9BU02 230 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 YIPF3Q9GZM5 350 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 TOLLIPQ9H0E2 274 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 CLN6Q9NWW5 311 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 SIGLEC8Q9NYZ4 499 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 GNG12Q9UBI6 72 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 AMMECR1Q9Y4X0 333 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-219ENST00000556413 STAB2Q8WWQ8 2551 aa1.68□□□□□ -2.14
SCFD1-219ENST00000556413 HMCN2Q8NDA2 5059 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TRAV8-7A0A075B6U6 113 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 IGHV3-21A0A0B4J1V1 117 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TMEM30CPA0ZSE6 113 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR4C45A6NMZ5 311 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 M0QZK8 103 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 M0R2N4 97 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 ZNF207O43670 478 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 MPZL2O60487 215 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 RBP4P02753 201 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 TRGV3P03979 118 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 GAPDHP04406 335 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 HMGN1P05114 100 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 RPSAP08865 295 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 HTR1AP08908 422 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 OR8U9P0C7N5 309 aa1.67□□□□□ -2.14
SCFD1-219ENST00000556413 UBCP0CG48 685 aaKnown RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 SAA2P0DJI9 122 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-219ENST00000556413 CGB3P0DN86 165 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms