RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 CCDC32Q9BV29 185 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 ELOVL1Q9BW60 279 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 PLEKHA3Q9HB20 300 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 PTTG2Q9NZH5 202 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 SHPKQ9UHJ6 478 aa11.99□□□□□ -0.49
CHMP1A-206ENST00000549139 LINC00854A0A1B0GVQ3 168 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 MFSD2BA6NFX1 497 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 PLA2G10O15496 165 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 UBE2MP61081 183 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 SLC35G3Q8N808 338 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 OR4C12Q96R67 309 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 PRR13Q9NZ81 148 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 S4R3C0 116 aa11.98□□□□□ -0.49
CHMP1A-206ENST00000549139 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 SAP30O75446 220 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 SFT2D2O95562 160 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 CLEC3BP05452 202 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 BTCP35070 178 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 ARL3P36405 182 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 SYNJ2BPP57105 145 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 SPCS3P61009 180 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 LYZL2Q7Z4W2 148 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 OR9G4Q8NGQ1 327 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 ATP6V0BQ99437 205 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
CHMP1A-206ENST00000549139 PPP5D1E7EU14 171 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 LYRM1O43325 122 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 VAMP1P23763 118 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 SNCAP37840 140 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 PPP1R1AQ13522 171 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 NMSQ5H8A3 153 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 SCARB1Q8WTV0 552 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 ENY2Q9NPA8 101 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
CHMP1A-206ENST00000549139 K7EIM0 57 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 LGALS9O00182 355 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 OR2C1O95371 312 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.53e-8■■□□□ 12.4
CHMP1A-206ENST00000549139 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 PVRIGQ6DKI7 326 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 SIGLEC8Q9NYZ4 499 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 FLVCR2Q9UPI3 526 aa11.95□□□□□ -0.5
CHMP1A-206ENST00000549139 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 I3L2K1 104 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 HLA-AP01891 365 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 CSN3P07498 182 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 HOXA1P49639 335 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 FAM106AQ4KMX7 169 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 WDR12Q9GZL7 423 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
CHMP1A-206ENST00000549139 C9orf170A2RU37 121 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 CORTO00230 105 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 LY86O95711 162 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 RNASE2P10153 161 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 SLC25A6P12236 298 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 GPR183P32249 361 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 SPSB3Q6PJ21 355 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 PLET1Q6UQ28 207 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 BSCL2Q96G97 398 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 TXN2Q99757 166 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 ZMAT4Q9H898 229 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
CHMP1A-206ENST00000549139 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 F8W735 103 aaPredicted RBP11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 TGOLN2O43493 480 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 MT-CO2P00403 227 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 IGLV1-51P01701 117 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 OR4E1P0C645 316 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 HTR2BP41595 481 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 MFAP4P55083 255 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
CHMP1A-206ENST00000549139 HERC2O95714 4834 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 CEBPZOSA8MTT3 80 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 PITX3O75364 302 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 TCRBP04435 133 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 TNFRSF9Q07011 255 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 LYG2Q86SG7 212 aa11.91□□□□□ -0.5
CHMP1A-206ENST00000549139 PINX1Q96BK5 328 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms