RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF141Q15928 474 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 CEACAM21Q3KPI0 293 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 CCDC153Q494R4 210 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 DNAL1Q4LDG9 190 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 TNFAIP8L3Q5GJ75 292 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 TTC33Q6PID6 262 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-207ENST00000544052 ZIC4Q8N9L1 334 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 SPANXA2-OT1Q8N9U9 137 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 LINC00477Q96M19 166 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 REG4Q9BYZ8 158 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 OR51I1Q9H343 314 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 HRASLSQ9HDD0 168 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 ALG5Q9Y673 324 aa2.13□□□□□ -2.07
SCFD1-207ENST00000544052 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 PRKDCP78527 4128 aaKnown RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 DOCK11Q5JSL3 2073 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 A8MUU9 505 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 HMGN4O00479 90 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 COPEO14579 308 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 MAS1P04201 325 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 TCRBP04435 133 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 BPGMP07738 259 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 OCM2P0CE71 109 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 OR12D1P0DN82 309 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 RPS4Y1P22090 263 aaKnown RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 GDI2P50395 445 aaKnown RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 CTBP2P56545 445 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 ARHGAP11BQ3KRB8 267 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 C6orf52Q5T4I8 152 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 TNFAIP8L2Q6P589 184 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 TMPPEQ6ZT21 453 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 MTERF4Q7Z6M4 381 aaKnown RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 IFT20Q8IY31 132 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 SLC35G3Q8N808 338 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 RTN4IP1Q8WWV3 396 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 SMIM19Q96E16 107 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 WFDC6Q9BQY6 131 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 TAPBPLQ9BX59 468 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 C1QTNF6Q9BXI9 259 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 ACER3Q9NUN7 267 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 MCTS1Q9ULC4 181 aaKnown RBP2.12□□□□□ -2.07
SCFD1-207ENST00000544052 USH1CQ9Y6N9 552 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 DSPPQ9NZW4 1301 aa2.12□□□□□ -2.07
SCFD1-207ENST00000544052 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 TGIF2-C20orf24A0A0A6YYL0 155 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 IGHV1-18A0A0C4DH31 117 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 RBFOX3A6NFN3 312 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ATP6V1G2-DDX39BF2Z307 99 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 TSPOP30536 169 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ZNF83P51522 516 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 DLX6P56179 175 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 EMX2Q04743 252 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 CASP8Q14790 479 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 LY6EQ16553 131 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 PDZD11Q5EBL8 140 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 C3orf33Q6P1S2 294 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 SLC25A34Q6PIV7 304 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 MIR7-3HGQ8N6C7 128 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 OR9I1Q8NGQ6 314 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 C10orf105Q8TEF2 133 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ORAOV1Q8WV07 137 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 BLNKQ8WV28 456 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 FMC1Q96HJ9 113 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 SLC35G5Q96KT7 338 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 PPP3R2Q96LZ3 170 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 KCTD7Q96MP8 289 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ARL6Q9H0F7 186 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 PAQR5Q9NXK6 330 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 BABAM2Q9NXR7 383 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 IGKV1D-42A0A075B6H8 117 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 TRAV40A0A0B4J280 105 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 A8MWL6 223 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 H3BQF6 201 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 CCRL2O00421 344 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 CXCR6O00574 342 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 RPP14O95059 124 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 CPSF4O95639 269 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 LHBP01229 141 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 HLA-AP01891 365 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 GUSBP08236 651 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 NQO1P15559 274 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 PRPS1L1P21108 318 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 POLR2GP62487 172 aaKnown RBP eCLIP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 HOXC5Q00444 222 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 AESQ08117 197 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ACSM3Q53FZ2 586 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 MRPL2Q5T653 305 aaKnown RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 PRSS54Q6PEW0 395 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 MORN3Q6PF18 240 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-207ENST00000544052 NEGR1Q7Z3B1 354 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 TESCQ96BS2 214 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 ROPN1LQ96C74 230 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 CBLN4Q9NTU7 201 aa2.11□□□□□ -2.07
SCFD1-207ENST00000544052 TMED7-TICAM2A0A0A6YYA0 188 aa2.1□□□□□ -2.07
SCFD1-207ENST00000544052 LOC389332A0A1B0GUA5 103 aa2.1□□□□□ -2.07
SCFD1-207ENST00000544052 LYNX1G3V0Z9 82 aa2.1□□□□□ -2.07
SCFD1-207ENST00000544052 FAAHO00519 579 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms