RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 OR8B3Q8NGG8 313 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 MS4A10Q96PG2 267 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 OR8B2Q96RD0 313 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 CHODLQ9H9P2 273 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 PXMP4Q9Y6I8 212 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 CHD6Q8TD26 2715 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 CD33P20138 364 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 RAB4AP20338 218 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 SPINK9Q5DT21 86 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
CLPTM1-202ENST00000541297 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ITGB1BP1O14713 200 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF705DP0CH99 300 aaPredicted RBP12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF705BP0CI00 300 aaPredicted RBP12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 DLX6P56179 175 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 TMEM144Q7Z5S9 345 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF709Q8N972 641 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 CELSR2Q9HCU4 2923 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 CENPEQ02224 2701 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 NDUFB4O95168 129 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 OR10J1P30954 320 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 ATP5G3P48201 142 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
CLPTM1-202ENST00000541297 MARCH11A6NNE9 402 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 FSTL3O95633 263 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 CDC34P49427 236 aaPredicted RBP12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 RPP30P78346 268 aaKnown RBP12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 S1PR3Q99500 378 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 SRSF1Q07955 248 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 ZNF705AQ6ZN79 300 aaPredicted RBP12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 C11orf42Q8N5U0 333 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 MED13LQ71F56 2210 aa12.4□□□□□ -0.42
CLPTM1-202ENST00000541297 SPG11Q96JI7 2443 aa12.4□□□□□ -0.43
CLPTM1-202ENST00000541297 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 P0C879 139 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 PPIAL4GP0DN37 164 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 REG1BP48304 166 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 SGMS2Q8NHU3 365 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 A1L4Q6 167 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 GRIFINA4D1Z8 144 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 ADMP35318 185 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 GPR6P46095 362 aaPredicted RBP12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 DDB2Q92466 427 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 RBMXL2O75526 392 aaKnown RBP12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 HPRT1P00492 218 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 CD99P14209 185 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 EFNA4P52798 201 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 FOXL1Q12952 345 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 IMMP2LQ96T52 175 aa12.39□□□□□ -0.43
CLPTM1-202ENST00000541297 C22orf46C9J442 243 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 PDE6DO43924 150 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 TET2Q6N021 2002 aaPredicted RBP12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 WNK2Q9Y3S1 2297 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 J3QR06 171 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 CT45A6P0DMU7 189 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 CT45A5P0DMU8 189 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 CT45A7P0DMV0 189 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 SFRP2Q96HF1 295 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
CLPTM1-202ENST00000541297 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 HNF1AP20823 631 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 THBS3P49746 956 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 Q8N7P7 452 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 CMTM2Q8TAZ6 248 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 PATZ1Q9HBE1 687 aaKnown RBP12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 BPIFB3P59826 476 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 TOMM20LQ6UXN7 152 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 SSBP3Q9BWW4 388 aaPredicted RBP12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
CLPTM1-202ENST00000541297 KMT2BQ9UMN6 2715 aaPredicted RBP12.36□□□□□ -0.43
CLPTM1-202ENST00000541297 TRBV20OR9-2A0A075B6H5 130 aa12.36□□□□□ -0.43
CLPTM1-202ENST00000541297 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
CLPTM1-202ENST00000541297 Q6ZWC4 215 aa12.36□□□□□ -0.43
CLPTM1-202ENST00000541297 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
CLPTM1-202ENST00000541297 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms