RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 CCL23P55773 120 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 RBM11P57052 281 aaKnown RBP3.79□□□□□ -1.8
KNTC1-209ENST00000536625 FXYD6P3P58550 94 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 RPS24P62847 133 aaKnown RBP3.79□□□□□ -1.8
KNTC1-209ENST00000536625 TNFAIP6P98066 277 aaPredicted RBP3.79□□□□□ -1.8
KNTC1-209ENST00000536625 HSPB3Q12988 150 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 VWC2Q2TAL6 325 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 FRG2Q64ET8 278 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 NOXRED1Q6NXP6 359 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 EBLN2Q6P2I7 272 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 C2orf91Q6ZV80 131 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 HMGN2P46Q86SG4 172 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 BPIFA4PQ86YQ2 179 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 C8orf31Q8N9H6 132 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 OR1L3Q8NH93 324 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 RPS4Y2Q8TD47 263 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 MBD3L1Q8WWY6 194 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 BAALCQ8WXS3 180 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 ARPC1AQ92747 370 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 PELI1Q96FA3 418 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 COQ2Q96H96 371 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 LINC00477Q96M19 166 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 PRELID3AQ96N28 172 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 SCGB3A2Q96PL1 93 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 SFXN3Q9BWM7 321 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 BCL2L10Q9HD36 194 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 SPANXCQ9NY87 97 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 HEBP2Q9Y5Z4 205 aa3.79□□□□□ -1.8
KNTC1-209ENST00000536625 VWA8A3KMH1 1905 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 THSD7BQ9C0I4 1608 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 NSG1A0A0A6YYJ2 146 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 TRBV9A0A0B4J1U6 114 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 CCL15-CCL14A0A0B4J2E2 113 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 LOC102725191A0A1B0GVB3 256 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 ZFP92A6NM28 416 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 TNFSF11O14788 317 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 ENSAO43768 121 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 PITX3O75364 302 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 KLF7O75840 302 aaPredicted RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 OR2H2O95918 312 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 IGHV3-7P01780 117 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SLC25A5P05141 298 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 OR9G9P0C7N8 305 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SMIM13P0DJ93 91 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 COX8AP10176 69 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 CPMP14384 443 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 CBLN1P23435 193 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 PTGDSP41222 190 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 INSL3P51460 131 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 RPL27P61353 136 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SUPT4H1P63272 117 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 EWSR1Q01844 656 aaKnown RBP eCLIP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 ZNF415Q09FC8 603 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 MLF2Q15773 248 aaPredicted RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 MS4A18Q3C1V0 323 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 ETDBQ3ZM63 59 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 GAGE2EQ4V326 116 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 Q56UQ5 140 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 NMSQ5H8A3 153 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 FAM166AQ6J272 317 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 LCN10Q6JVE6 187 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 TMEM64Q6YI46 380 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 RFLNAQ6ZTI6 216 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 TRAPPC6BQ86SZ2 158 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 MEX3DQ86XN8 651 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SLC22A18ASQ8N1D0 253 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 FGFRL1Q8N441 504 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 LRTM2Q8N967 370 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 OR4C13Q8NGP0 309 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 PIGCQ92535 297 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 RASL10AQ92737 203 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 BADQ92934 168 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 LSM10Q969L4 123 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 MRPL24Q96A35 216 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 RPEQ96AT9 228 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 RAB37Q96AX2 223 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SNRNP40Q96DI7 357 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 SLC25A44Q96H78 314 aaPredicted RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 GMPPAQ96IJ6 420 aaPredicted RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 MRPL32Q9BYC8 188 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 IFI27L2Q9H2X8 130 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 ELOVL3Q9HB03 270 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 TECRQ9NZ01 308 aaKnown RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 IDI2-AS1Q9NZ38 188 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 GAGE2DQ9UEU5 116 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 OR2W1Q9Y3N9 320 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 R4GN57 208 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 NUP214P35658 2090 aaPredicted RBP3.78□□□□□ -1.8
KNTC1-209ENST00000536625 DOCK4Q8N1I0 1966 aa3.78□□□□□ -1.8
KNTC1-209ENST00000536625 GLI3P10071 1580 aa3.77□□□□□ -1.81
KNTC1-209ENST00000536625 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
KNTC1-209ENST00000536625 TRBV5-5A0A0J9YX44 114 aa3.77□□□□□ -1.81
KNTC1-209ENST00000536625 FAM24AA6NFZ4 105 aa3.77□□□□□ -1.81
KNTC1-209ENST00000536625 CEACAM18A8MTB9 384 aa3.77□□□□□ -1.81
KNTC1-209ENST00000536625 NPFFO15130 113 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms