RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 P2RX4Q99571 388 aa13.38□□□□□ -0.27
CTSB-229ENST00000533572 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 L7N2F9 121 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
CTSB-229ENST00000533572 SIX6O95475 246 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 IFNA10P01566 189 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 TPPP2P59282 170 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 POLR2GP62487 172 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTSB-229ENST00000533572 RAB11AP62491 216 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 VAMP2P63027 116 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 LCNL1Q6ZST4 164 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 SMIM8Q96KF7 97 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 UBE2E2Q96LR5 201 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
CTSB-229ENST00000533572 TGP01266 2768 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 K7EPK0 472 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 TSC22D2O75157 780 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 GIPP09681 153 aaPredicted RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 RNASE2P10153 161 aaKnown RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 NPY1RP25929 384 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 MYCNOSP40205 109 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 FGL1Q08830 312 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 EXOSC2Q13868 293 aaKnown RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 BEAN1Q3B7T3 259 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 C18orf65Q6ZTR6 163 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 MS4A10Q96PG2 267 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 GPR61Q9BZJ8 451 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
CTSB-229ENST00000533572 TNCP24821 2201 aa13.36□□□□□ -0.27
CTSB-229ENST00000533572 SSSCA1O60232 199 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 IAPPP10997 89 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 IGLL1P15814 213 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 CXCL3P19876 107 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 S100A10P60903 97 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 RAP2BP61225 183 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 RHOGP84095 191 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 ATP5G2Q06055 141 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 RAB32Q13637 225 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 FANCD2OSQ96PS1 177 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 ATP6V0BQ99437 205 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 FBXL7Q9UJT9 491 aa13.35□□□□□ -0.27
CTSB-229ENST00000533572 STRAPQ9Y3F4 350 aaKnown RBP13.35□□□□□ -0.27
CTSB-229ENST00000533572 RPS10-NUDT3A0A1W2PQS6 291 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 ETFRF1Q6IPR1 90 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 ETV3LQ6ZN32 361 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 ZNF491Q8N8L2 437 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 PPP1R1CQ8WVI7 109 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 DPF1Q92782 380 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 KLK15Q9H2R5 256 aa13.34□□□□□ -0.27
CTSB-229ENST00000533572 RCL1Q9Y2P8 373 aaKnown RBP13.34□□□□□ -0.27
CTSB-229ENST00000533572 E5RGE8 158 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 CCL24O00175 119 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 DEDDO75618 318 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 OR2J3O76001 311 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 OR8U8P0C7N1 319 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 KPRPQ5T749 579 aaPredicted RBP13.33□□□□□ -0.28
CTSB-229ENST00000533572 C4orf3Q8WVX3 66 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 EEF1AKMT3Q96AZ1 226 aa13.33□□□□□ -0.28
CTSB-229ENST00000533572 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
CTSB-229ENST00000533572 GAR1Q9NY12 217 aaKnown RBP13.33□□□□□ -0.28
CTSB-229ENST00000533572 TRBV7-1A0A0A6YYK4 115 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 MPC2O95563 127 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 PRH1P02810 166 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 IFNA4P05014 189 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 KIAA0141Q14154 515 aaPredicted RBP13.32□□□□□ -0.28
CTSB-229ENST00000533572 DEFB136Q30KP8 78 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 LRRC37A5PQ49AS3 106 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 THAP6Q8TBB0 222 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 MISP3Q96FF7 219 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 RAX2Q96IS3 184 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 DUX3Q96PT4 197 aa13.32□□□□□ -0.28
CTSB-229ENST00000533572 SCGB2A1O75556 95 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 SLC25A4P12235 298 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 MFAP2P55001 183 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 PAX9P55771 341 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 RUNX1Q01196 453 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 PRSS54Q6PEW0 395 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 CACNG8Q8WXS5 425 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 TXN2Q99757 166 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
CTSB-229ENST00000533572 C15orf62A8K5M9 175 aa13.3□□□□□ -0.28
CTSB-229ENST00000533572 NDUFB8O95169 186 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms