RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 LY6G6CO95867 125 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 PI3P19957 117 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 SNCAP37840 140 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 HSPE1P61604 102 aaKnown RBP13.19□□□□□ -0.3
PCF11-206ENST00000533018 TNFRSF9Q07011 255 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 IZUMO4Q1ZYL8 232 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 RNF183Q96D59 192 aa13.19□□□□□ -0.3
PCF11-206ENST00000533018 NXF2Q9GZY0 626 aaKnown RBP13.19□□□□□ -0.3
PCF11-206ENST00000533018 NUPR2A6NF83 97 aa13.18□□□□□ -0.3
PCF11-206ENST00000533018 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCF11-206ENST00000533018 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
PCF11-206ENST00000533018 ZNF114Q8NC26 417 aa13.18□□□□□ -0.3
PCF11-206ENST00000533018 OR10C1Q96KK4 312 aa13.18□□□□□ -0.3
PCF11-206ENST00000533018 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
PCF11-206ENST00000533018 MAP6D1Q9H9H5 199 aa13.18□□□□□ -0.3
PCF11-206ENST00000533018 IFNA17P01571 189 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
PCF11-206ENST00000533018 AKR1C2P52895 323 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 CMC4P56277 68 aaPredicted RBP13.17□□□□□ -0.3
PCF11-206ENST00000533018 PIGPP57054 158 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 ZNF124Q15973 351 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 LINC00476Q8WZB0 136 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 AP3S1Q92572 193 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
PCF11-206ENST00000533018 ATG12O94817 140 aa13.16□□□□□ -0.3
PCF11-206ENST00000533018 CD3DP04234 171 aa13.16□□□□□ -0.3
PCF11-206ENST00000533018 NPBWR1P48145 328 aa13.16□□□□□ -0.3
PCF11-206ENST00000533018 TRIM16LQ309B1 348 aa13.16□□□□□ -0.3
PCF11-206ENST00000533018 ZNF486Q96H40 463 aaPredicted RBP13.16□□□□□ -0.3
PCF11-206ENST00000533018 C3orf85A0A1B0GTC6 90 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 MPTX1A8MV57 137 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
PCF11-206ENST00000533018 PPP5CP53041 499 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 RND3P61587 244 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 RPL11P62913 178 aaKnown RBP13.15□□□□□ -0.3
PCF11-206ENST00000533018 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
PCF11-206ENST00000533018 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 OR52I2Q8NH67 350 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 RNASE11Q8TAA1 199 aaKnown RBP13.15□□□□□ -0.3
PCF11-206ENST00000533018 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 CSTL1Q9H114 145 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 ENY2Q9NPA8 101 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 EXTL2Q9UBQ6 330 aa13.15□□□□□ -0.3
PCF11-206ENST00000533018 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
PCF11-206ENST00000533018 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 ST8SIA3O43173 380 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
PCF11-206ENST00000533018 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCF11-206ENST00000533018 SCGB2B2Q4G0G5 96 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 TOMM20LQ6UXN7 152 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 ZNF414Q96IQ9 312 aa13.14□□□□□ -0.31
PCF11-206ENST00000533018 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCF11-206ENST00000533018 A0A0B4J293 547 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 ETV6P41212 452 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 SP6Q3SY56 376 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 ARRDC1Q8N5I2 433 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 RRNAD1Q96FB5 475 aaKnown RBP13.13□□□□□ -0.31
PCF11-206ENST00000533018 RARRES2Q99969 163 aa13.13□□□□□ -0.31
PCF11-206ENST00000533018 DFFBO76075 338 aa13.12□□□□□ -0.31
PCF11-206ENST00000533018 APOHP02749 345 aaPredicted RBP13.12□□□□□ -0.31
PCF11-206ENST00000533018 CD5P06127 495 aa13.12□□□□□ -0.31
PCF11-206ENST00000533018 ZNF182P17025 639 aaPredicted RBP13.12□□□□□ -0.31
PCF11-206ENST00000533018 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
PCF11-206ENST00000533018 OR4D10Q8NGI6 311 aa13.12□□□□□ -0.31
PCF11-206ENST00000533018 NAA50Q9GZZ1 169 aaKnown RBP13.12□□□□□ -0.31
PCF11-206ENST00000533018 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
PCF11-206ENST00000533018 CORTO00230 105 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 TMEM50AO95807 157 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
PCF11-206ENST00000533018 TBPP20226 339 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 OPRK1P41145 380 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 TERB2Q8NHR7 220 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 C15orf40Q8WUR7 153 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
PCF11-206ENST00000533018 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 RAB3DO95716 219 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 TAS2R19P59542 299 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 CTF1Q16619 201 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 OR13C8Q8NGS7 320 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
PCF11-206ENST00000533018 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms