RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SEC22AQ96IW7 307 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 GNG7O60262 68 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 SPINK9Q5DT21 86 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 TBC1D26Q86UD7 250 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 LILRB2Q8N423 598 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 TXN2Q99757 166 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 MFFQ9GZY8 342 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 Q9H521 79 aa13.47□□□□□ -0.25
SSSCA1-206ENST00000531405 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 IFNA4P05014 189 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 PRCDQ00LT1 54 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 TOMM20LQ6UXN7 152 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 H2BFWTQ7Z2G1 175 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 FAM24BQ8N5W8 94 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 MRGPRFQ96AM1 343 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 MS4A6AQ9H2W1 248 aa13.46□□□□□ -0.25
SSSCA1-206ENST00000531405 PCLOQ9Y6V0 5065 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 TMEM127O75204 238 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 EIF4EP06730 217 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 PRSS3P35030 304 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 RPS19P39019 145 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 DEFB131AP59861 70 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 PAFAH1B2P68402 229 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 IZUMO4Q1ZYL8 232 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
SSSCA1-206ENST00000531405 DNASE2O00115 360 aaPredicted RBP13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 DFFBO76075 338 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 TSPAN5P62079 268 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 LSM3P62310 102 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 TMEM187Q14656 261 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 CROCCP3Q8IVE0 287 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 GINS3Q9BRX5 216 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
SSSCA1-206ENST00000531405 HSPE1P61604 102 aaKnown RBP13.43□□□□□ -0.26
SSSCA1-206ENST00000531405 RPL11P62913 178 aaKnown RBP13.43□□□□□ -0.26
SSSCA1-206ENST00000531405 FAM212BQ9NTI7 297 aaPredicted RBP13.43□□□□□ -0.26
SSSCA1-206ENST00000531405 PUS1Q9Y606 427 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSSCA1-206ENST00000531405 FAT2Q9NYQ8 4349 aa13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 A0A1B0GU03 582 aa13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 S100GP29377 79 aa13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 ERHP84090 104 aaKnown RBP13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 LPCAT3Q6P1A2 487 aa13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 GPX8Q8TED1 209 aa13.42□□□□□ -0.26
SSSCA1-206ENST00000531405 DNAH2Q9P225 4427 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 IGLL5B9A064 214 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 ZNF600Q6ZNG1 722 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 Q8NAQ8 132 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 RABAC1Q9UI14 185 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
SSSCA1-206ENST00000531405 CD5P06127 495 aa13.4□□□□□ -0.26
SSSCA1-206ENST00000531405 NPBWR1P48145 328 aa13.4□□□□□ -0.26
SSSCA1-206ENST00000531405 SNX29P2Q8IUI4 249 aa13.4□□□□□ -0.26
SSSCA1-206ENST00000531405 STHQ8IWL8 128 aa13.4□□□□□ -0.26
SSSCA1-206ENST00000531405 DNAH17Q9UFH2 4485 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 M0QYG6 137 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 TMEM50AO95807 157 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 IGKV1-5P01602 117 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 GIG44P09565 113 aaPredicted RBP13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 RBMY1A1P0DJD3 496 aaKnown RBP13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 RBMY1CP0DJD4 496 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 UCP3P55916 312 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 RBMY1FQ15415 496 aaKnown RBP13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 KCTD21Q4G0X4 260 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 YIPF6Q96EC8 236 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 COMMD3Q9UBI1 195 aa13.39□□□□□ -0.27
SSSCA1-206ENST00000531405 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 PI3P19957 117 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 SNCAP37840 140 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 TCTAP57738 103 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 SLC35G3Q8N808 338 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 STXBP6Q8NFX7 210 aa13.38□□□□□ -0.27
SSSCA1-206ENST00000531405 A0A0B4J293 547 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 IFNA17P01571 189 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 RNASE2P10153 161 aaKnown RBP13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 C4BPBP20851 252 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 NPPCP23582 126 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 RCVRNP35243 200 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 PPP5CP53041 499 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 MLANAQ16655 118 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 TP53RKQ96S44 253 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 TMEM231Q9H6L2 316 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 SCPEP1Q9HB40 452 aa13.37□□□□□ -0.27
SSSCA1-206ENST00000531405 C11orf94C9JXX5 98 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms