RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 VSIRQ9H7M9 311 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 IGKV3D-15A0A087WSY6 115 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 SNAI2O43623 268 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 LGALS3P17931 250 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 IGHV1-2P23083 117 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 ACSF3Q4G176 576 aaPredicted RBP12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 ADCYAP1P18509 176 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 DLX6P56179 175 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 TRAV8-6A0A0B4J262 113 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 KLK15Q9H2R5 256 aa12.92□□□□□ -0.34
PCDHA4-203ENST00000530339 TNFSF13O75888 250 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 ZFP36L1Q07352 338 aaKnown RBP12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 CIARTQ8N365 385 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 CELA3AP09093 270 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 TMEM160Q9NX00 188 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 SPCS1Q9Y6A9 102 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 TRAV24A0A0B4J272 114 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 A0A1W2PRE2 83 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 GATA2P23769 480 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 C18orf15Q96N68 181 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 CRXO43186 299 aaPredicted RBP12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 PRSS2P07478 247 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 ESPL1Q14674 2120 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 ZNF318Q5VUA4 2279 aa12.91□□□□□ -0.34
PCDHA4-203ENST00000530339 IGKV1-12A0A0C4DH73 117 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 IGKV1D-12P01611 117 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 LYL1P12980 280 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 C17orf82Q86X59 251 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 ATP5LO75964 103 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 CRYGSP22914 178 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 NUTF2P61970 127 aaKnown RBP12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 GPX1P07203 203 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 GPR183P32249 361 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 FOXL1Q12952 345 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 C1orf194Q5T5A4 169 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
PCDHA4-203ENST00000530339 UPK2O00526 184 aa12.9□□□□□ -0.35
PCDHA4-203ENST00000530339 UBE2L6O14933 153 aa12.9□□□□□ -0.35
PCDHA4-203ENST00000530339 RAMP3O60896 148 aa12.9□□□□□ -0.35
PCDHA4-203ENST00000530339 CIRBPQ14011 172 aaKnown RBP12.9□□□□□ -0.35
PCDHA4-203ENST00000530339 FBLN7Q53RD9 439 aa12.9□□□□□ -0.35
PCDHA4-203ENST00000530339 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 MDC1Q14676 2089 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 A0A0G2JLM5 398 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ADIPOQQ15848 244 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 TEX45Q8NA69 505 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 FAM168AQ92567 244 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 A0A0G2JMM0 328 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 A0A1W2PPB8 328 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 A0A1W2PRS3 328 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 KIR3DP1A8MWS1 328 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 H7C1H1 209 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 TIMP3P35625 211 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 TFPI2P48307 235 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 LURAP1LQ8IV03 231 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
PCDHA4-203ENST00000530339 FOXI3A8MTJ6 420 aaPredicted RBP12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 OR4X2Q8NGF9 303 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 C5orf30Q96GV9 206 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 ANK1P16157 1881 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 NTN3O00634 580 aaPredicted RBP12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 EFNB3Q15768 340 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 QRFPP83859 136 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 WDR82Q6UXN9 313 aa12.88□□□□□ -0.35
PCDHA4-203ENST00000530339 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 Q9H3A6 140 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 RPP25LQ8N5L8 163 aaKnown RBP12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 C2orf88Q9BSF0 95 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 YAE1D1Q9NRH1 226 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 MRPL16Q9NX20 251 aaKnown RBP12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 C21orf62Q9NYP8 219 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 A0A1B0GWB2 263 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms