RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 IGHV3-48P01763 117 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 HIST1H1BP16401 226 aaKnown RBP10.65□□□□□ -0.7
CD44-224ENST00000526669 SUB1P53999 127 aaKnown RBP eCLIP10.65□□□□□ -0.7
CD44-224ENST00000526669 CYCSP99999 105 aaKnown RBP10.65□□□□□ -0.7
CD44-224ENST00000526669 EXOSC2Q13868 293 aaKnown RBP10.65□□□□□ -0.7
CD44-224ENST00000526669 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 BSXQ3C1V8 233 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 C2orf83Q53S99 150 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 RNF152Q8N8N0 203 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 MYOZ3Q8TDC0 251 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 CITED1Q99966 193 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 ZNF747Q9BV97 191 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 OR5AC2Q9NZP5 309 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
CD44-224ENST00000526669 H0YIZ8 118 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 CYB5BO43169 146 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 BCAP31P51572 246 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 ATP5G2Q06055 141 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 SMIM8Q96KF7 97 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 C11orf1Q9H5F2 150 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 STRAPQ9Y3F4 350 aaKnown RBP10.64□□□□□ -0.71
CD44-224ENST00000526669 U3KQ87 197 aa10.64□□□□□ -0.71
CD44-224ENST00000526669 TRAV14DV4A0A0A6YYC5 116 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 ANKRD34BA5PLL1 514 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 FAM24AA6NFZ4 105 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 ADARB2-AS1A8MUL3 147 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 SMLR1H3BR10 107 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 K7EIM0 57 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 DEDDO75618 318 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 MPC2O95563 127 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 MT-CO2P00403 227 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 IFNA4P05014 189 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
CD44-224ENST00000526669 METTL15P1P0C7V9 234 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 PVALBP20472 110 aaPredicted RBP10.63□□□□□ -0.71
CD44-224ENST00000526669 MLANAQ16655 118 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 C8orf86Q6ZUL3 223 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 NECAP1Q8NC96 275 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 DUX3Q96PT4 197 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 FNDC4Q9H6D8 234 aaPredicted RBP10.63□□□□□ -0.71
CD44-224ENST00000526669 MBD2Q9UBB5 411 aa10.63□□□□□ -0.71
CD44-224ENST00000526669 A0A0G2JLM5 398 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 I3L2K1 104 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 BRI3O95415 125 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 RLN2P04090 185 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 OPRK1P41145 380 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 CAV2P51636 162 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 RAB11AP62491 216 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
CD44-224ENST00000526669 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 Q5BKY6 102 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 OR8G2PQ6IF36 304 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 ETV3LQ6ZN32 361 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 UBAC2Q8NBM4 344 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 EEF1AKMT3Q96AZ1 226 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 UBE2E2Q96LR5 201 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 ZC4H2Q9NQZ6 224 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 THYN1Q9P016 225 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
CD44-224ENST00000526669 IGSF23A1L1A6 192 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 TSC22D2O75157 780 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
CD44-224ENST00000526669 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
CD44-224ENST00000526669 RAP2BP61225 183 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 PVRIGQ6DKI7 326 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 ACSM6Q6P461 480 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 TMEM14EPQ6UXP3 125 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 CLEC19AQ6UXS0 136 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 NOXA1Q86UR1 476 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 NDUFA11Q86Y39 141 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 OR2T35Q8NGX2 323 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 SCARB1Q8WTV0 552 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 C4orf3Q8WVX3 66 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 DCUN1D4Q92564 292 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 RNF126Q9BV68 326 aa10.61□□□□□ -0.71
CD44-224ENST00000526669 RANGRFQ9HD47 186 aaPredicted RBP10.61□□□□□ -0.71
CD44-224ENST00000526669 MRPL36Q9P0J6 103 aaKnown RBP10.61□□□□□ -0.71
CD44-224ENST00000526669 TRRAPQ9Y4A5 3859 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 IGHV4OR15-8A0A075B7B6 117 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 A0A087WW49 117 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 E5RGE8 158 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 I3L521 148 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 CORTO00230 105 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 CST7O76096 145 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 GPR183P32249 361 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 TAS2R30P59541 319 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 ARL16Q0P5N6 197 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 Q56UQ5 140 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms