RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SELENOVP59797 346 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 MPV17L2Q567V2 206 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 PMS2CLQ68D20 193 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 Q8TCH9 128 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 LOXL4Q96JB6 756 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 FREM2Q5SZK8 3169 aa10.56□□□□□ -0.72
TRAPPC9-208ENST00000520857 C15orf61A6NNL5 157 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 H3BTX0 84 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 SP1P08047 785 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 IGHV1-2P23083 117 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 CA7P43166 264 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 TMEM249Q2WGJ8 235 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 MOGAT3Q86VF5 341 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 CD177Q8N6Q3 437 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 TMEM105Q8N8V8 129 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 A0A1W2PN81 502 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 NKX6-3A6NJ46 265 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 ISLRO14498 428 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 TNFSF15O95150 251 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 IGLL1P15814 213 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 ORM2P19652 201 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 CD24P25063 80 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 CHEK1O14757 476 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 SNAI2O43623 268 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 JPT1Q9UK76 154 aa10.55□□□□□ -0.72
TRAPPC9-208ENST00000520857 WNK2Q9Y3S1 2297 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 MGST3O14880 152 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 PROP1O75360 226 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 TMEM70Q9BUB7 260 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 PAXXQ9BUH6 204 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 GAL3ST2Q9H3Q3 398 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 LAMTOR5O43504 91 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 ZNF134P52741 427 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 GNG5P63218 68 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 RTL8BQ17RB0 113 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 ZNF835Q9Y2P0 537 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 CEP192Q8TEP8 1941 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 KIR2DS2P43631 304 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 REG1BP48304 166 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
TRAPPC9-208ENST00000520857 NTN3O00634 580 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 TBR1Q16650 682 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 ZNF766Q5HY98 468 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 PRNDQ9UKY0 176 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 SAA2-SAA4A0A096LPE2 208 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 CTRLP40313 264 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 SPACA3Q8IXA5 215 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 SNRNP40Q96DI7 357 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 GP6Q9HCN6 339 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 APELAP0DMC3 54 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 ZNF841Q6ZN19 808 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
TRAPPC9-208ENST00000520857 SPTBN2O15020 2390 aa10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 PPOXP50336 477 aa10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 C10orf113Q5VZT2 155 aa10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 Q8N976 141 aa10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.72
TRAPPC9-208ENST00000520857 CORTO00230 105 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 MZT1Q08AG7 82 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 NUDT10Q8NFP7 164 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 NUDT11Q96G61 164 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGHV3-21A0A0B4J1V1 117 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 C11orf53Q8IXP5 236 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 ARL6IP6Q8N6S5 226 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 IFI27L2Q9H2X8 130 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-208ENST00000520857 NAV3Q8IVL0 2385 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 IGHV2OR16-5A0A0B4J2B6 119 aa10.51□□□□□ -0.73
TRAPPC9-208ENST00000520857 CECR9P0C854 216 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms