RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 Q6ZR03 302 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 SPRY4Q9C004 299 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 IFI27L2Q9H2X8 130 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 ATP5IP56385 69 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 NHLRC2Q8NBF2 726 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 WFIKKN1Q96NZ8 548 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 NDFIP1Q9BT67 221 aa9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 RALYQ9UKM9 306 aaKnown RBP9.33□□□□□ -0.92
PCDHGB4-201ENST00000519479 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 APOBEC3AP31941 199 aaPredicted RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 LGALS7P47929 136 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 MFAP2P55001 183 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 FAM222BQ8WU58 562 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 YTHDF2Q9Y5A9 579 aaKnown RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 B9A039 149 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 P01737 135 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 CXCL1P09341 107 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 DOLPP1Q86YN1 238 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 UPK2O00526 184 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 COX6B1P14854 86 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 LMO1P25800 156 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 COL8A1P27658 744 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 ARF6P62330 175 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 PAFAH1B2P68402 229 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 C19orf24Q9BVV8 132 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 ZNF785A8K8V0 405 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 SNRNP40Q96DI7 357 aaKnown RBP9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 MED13LQ71F56 2210 aa9.32□□□□□ -0.92
PCDHGB4-201ENST00000519479 PGPA6NDG6 321 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 PLCE1Q9P212 2302 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 VPS13AQ96RL7 3174 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 M0R2Z0 102 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 C10orf91Q5T1B1 145 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 TMEM183AQ8IXX5 376 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 RPRMLQ8N4K4 120 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 OR2D3Q8NGH3 330 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 CLEC7AQ9BXN2 247 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 FAM90A9PA6NNJ1 464 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 CORTO00230 105 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 SOD3P08294 240 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 LRP4O75096 1905 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 PRR14LQ5THK1 2151 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 SLC17A3O00476 420 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 MOSP00540 346 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 ST6GALNAC3Q8NDV1 305 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 SGK494Q96LW2 274 aa9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 MRPL18Q9H0U6 180 aaKnown RBP9.31□□□□□ -0.92
PCDHGB4-201ENST00000519479 GPR6P46095 362 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 H3BTX0 84 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 TNFSF13O75888 250 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 APCSP02743 223 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 C1QTNF9P0C862 333 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 GPX4P36969 197 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 PNKDQ8N490 385 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 TMEM191AQ9H0A3 160 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 CBLN1P23435 193 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 HTR1DP28221 377 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 PLA2G5P39877 138 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 LCN2P80188 198 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 PET117Q6UWS5 81 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 DKK4Q9UBT3 224 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 EML6Q6ZMW3 1958 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 USF3Q68DE3 2245 aa9.3□□□□□ -0.92
PCDHGB4-201ENST00000519479 C15orf62A8K5M9 175 aa9.29□□□□□ -0.92
PCDHGB4-201ENST00000519479 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms