RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MT-ND4LP03901 98 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 PAEPP09466 180 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 TSPAN19P0C672 248 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 SLC25A16P16260 332 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 LGALS3P17931 250 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 SDC2P34741 201 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 SRP14P37108 136 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 TSPEAR-AS2P59090 65 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 MAXP61244 160 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 RPS25P62851 125 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 UBE2BP63146 152 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 PSG7Q13046 419 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 UBE2SQ16763 222 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 GLYATL3Q5SZD4 288 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 C10orf91Q5T1B1 145 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 C1orf140Q5VVS0 124 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 BPIFA4PQ86YQ2 179 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 MIR7-3HGQ8N6C7 128 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZFAND2AQ8N6M9 145 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR52R1Q8NGF1 315 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 OR4C6Q8NH72 309 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 TEX37Q96LM6 180 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 MGLLQ99685 303 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 LXNQ9BS40 222 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF471Q9BX82 626 aaPredicted RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNF122Q9H9V4 155 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 NAT8Q9UHE5 227 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 NAT8BQ9UHF3 227 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 MCTS1Q9ULC4 181 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRAPPC1Q9Y5R8 145 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 ICOSQ9Y6W8 199 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 KDM5CP41229 1560 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF638Q14966 1978 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 GTF3C1Q12789 2109 aa2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 BAZ1BQ9UIG0 1483 aaKnown RBP2.65□□□□□ -1.99
RNU4-60P-201ENST00000517239 ANKRD12Q6UB98 2062 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRBV24-1A0A075B6N3 115 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 A8MWP6 167 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 F6UZH7 168 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 M0R378 163 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 LECT2O14960 151 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 SH2D1AO60880 128 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 GGCTO75223 188 aaKnown RBP2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 CST7O76096 145 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 NAPSAO96009 420 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 CXCL1P09341 107 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 FABP2P12104 132 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 PSMB8P28062 276 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 HLA-DMBP28068 263 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 NDUFA6P56556 154 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 SELENOWP63302 87 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 BIKQ13323 160 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 MSMO1Q15800 293 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TAF9Q16594 264 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 DEFB116Q30KQ4 102 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNASE10Q5GAN6 216 aaKnown RBP2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 SPANXN3Q5MJ09 141 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 Q5XG85 94 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRAPPC6BQ86SZ2 158 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF329Q86UD4 541 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 ZNF695Q8IW36 515 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 RNF175Q8N4F7 328 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TEX29Q8N6K0 151 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 C14orf144Q96I85 54 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 PDCD10Q9BUL8 212 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 C11orf1Q9H5F2 150 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 LHX9Q9NQ69 397 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 COA4Q9NYJ1 87 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TNFSF18Q9UNG2 199 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 BAIAP2Q9UQB8 552 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 OBSL1O75147 1896 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 NCKAP5O14513 1909 aa2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TDRD6O60522 2096 aaKnown RBP2.64□□□□□ -1.99
RNU4-60P-201ENST00000517239 TRAPPC8Q9Y2L5 1435 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 A0A087X0T9 212 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 A0A096LNJ9 63 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV6D-41A0A0C4DH26 115 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 IGKV1-9A0A0C4DH69 117 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 H3BMM0 161 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 PHOX2AO14813 284 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 NDUFB2O95178 105 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 P0DMU3 169 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 FAM231AP0DMU4 169 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 FAM231CP0DMU5 169 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 CCL3P10147 92 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 CRHBPP24387 322 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 RBP2P50120 134 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMBIM6P55061 237 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 WNT4P56705 351 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 RBM11P57052 281 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 COPZ1P61923 177 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 HIST1H4AP62805 103 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 EIF5AP63241 154 aaKnown RBP2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
RNU4-60P-201ENST00000517239 TMEM69Q5SWH9 247 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms