RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 MRAP2Q96G30 205 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CCL19Q99731 98 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PRR15LQ9BU68 103 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MIXL1Q9H2W2 232 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 FBXO44Q9H4M3 255 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 RMND1Q9NWS8 449 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 MAT2BQ9NZL9 334 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 EMC3Q9P0I2 261 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 HSPB8Q9UJY1 196 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 BOKQ9UMX3 212 aaPredicted RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 FUT9Q9Y231 359 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 SLC35A3Q9Y2D2 325 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PDZD2O15018 2839 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 PHIPQ8WWQ0 1821 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 BCL9O00512 1426 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 TNS3Q68CZ2 1445 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 COL14A1Q05707 1796 aaKnown RBP-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 CASZ1Q86V15 1759 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ANKRD36A6QL64 1941 aa-0.32□□□□□ -2.46
RNU4-49P-201ENST00000516080 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CREBBPQ92793 2442 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 POLQO75417 2590 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 COL6A3P12111 3177 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 LAMC1P11047 1609 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 PTPN13Q12923 2485 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TRAV12-1A0A0B4J245 112 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 A0A0D9SG52 128 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 A0A1B0GW54 56 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 FABP5P3A8MUU1 101 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 C9JCJ5 164 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 JMJD7-PLA2G4BH0Y9G9 81 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 PSMD12O00232 456 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TOX3O15405 576 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SGCEO43556 437 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 NUPR1O60356 82 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 YEATS4O95619 227 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SNAP29O95721 258 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 IGHV3-7P01780 117 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 HBZP02008 142 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TYMSP04818 313 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CRYGCP07315 174 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CD14P08571 375 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 FAM228BP0C875 321 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 HIST1H1CP16403 213 aaKnown RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 ADORA1P30542 326 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SPRR2BP35325 72 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 HSPA9P38646 679 aaKnown RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CAV3P56539 151 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 HERVK_113P63121 156 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SUPT4H1P63272 117 aaKnown RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 RHEBQ15382 184 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 BSXQ3C1V8 233 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SSX8Q7RTT4 187 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 LRRC6Q86X45 466 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 Q8N402 240 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR4A15Q8NGL6 344 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR2T4Q8NH00 348 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR2T27Q8NH04 317 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 Q8WTZ3 238 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CCDC12Q8WUD4 166 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CANT1Q8WVQ1 401 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 ZNF75CPQ92670 426 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 KIAA1143Q96AT1 154 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CPNE2Q96FN4 548 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 ACY3Q96HD9 319 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CATSPER2Q96P56 530 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SCGB3A1Q96QR1 104 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR7D2Q96RA2 312 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TP53RKQ96S44 253 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SLC25A21Q9BQT8 299 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 MED10Q9BTT4 135 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMEM208Q9BTX3 173 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 NSRP1Q9H0G5 558 aaKnown RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 METTL9Q9H1A3 318 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 TCEAL2Q9H3H9 227 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 COMMD9Q9P000 198 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR52A1Q9UKL2 312 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 V9GYY5 206 aaPredicted RBP-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 RGPD2P0DJD1 1756 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 HECW2Q9P2P5 1572 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 USF3Q68DE3 2245 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CHD9Q3L8U1 2897 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 VWFP04275 2813 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 CTTNBP2Q8WZ74 1663 aa-0.33□□□□□ -2.46
RNU4-49P-201ENST00000516080 SVEP1Q4LDE5 3571 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 MYH7P12883 1935 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CACNA1AO00555 2505 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 A0A1B0GX12 115 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 F2Z2F3 143 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 I3L521 148 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 M0R381 172 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 M0R3E3 92 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 SULT1C2O00338 296 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 LIN7AO14910 233 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 HMMRO75330 724 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ARL6IP5O75915 188 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 LYZL6O75951 148 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR2B3O76000 313 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 NSA2O95478 260 aaKnown RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms