RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZNF182P17025 639 aaPredicted RBP10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 SSBP1Q04837 148 aaKnown RBP10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 RHPN1-AS1Q9BWJ2 59 aa10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 RABL2AQ9UBK7 228 aaPredicted RBP10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 CACFD1Q9UGQ2 172 aa10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 RABL2BQ9UNT1 228 aa10.11□□□□□ -0.79
CCHCR1-227ENST00000508852 CHEK1O14757 476 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 AKR1C2P52895 323 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 PIGPP57054 158 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 MRPS10P82664 201 aaKnown RBP10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 SLC35G3Q8N808 338 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 RNF183Q96D59 192 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 RRNAD1Q96FB5 475 aaKnown RBP10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 COPZ2Q9P299 210 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 MTFP1Q9UDX5 166 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 UBQLN2Q9UHD9 624 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 SELENOKQ9Y6D0 94 aa10.1□□□□□ -0.79
CCHCR1-227ENST00000508852 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 DFFBO76075 338 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 IFNA17P01571 189 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 IGKV1-39P01597 117 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 IGKV1D-39P04432 117 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 TAS2R19P59542 299 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 LHFPL1Q86WI0 220 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 FAM219AQ8IW50 185 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 TERB2Q8NHR7 220 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 GATAD1Q8WUU5 269 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 PINX1Q96BK5 328 aaKnown RBP10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 RNF2Q99496 336 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 EXTL2Q9UBQ6 330 aa10.09□□□□□ -0.79
CCHCR1-227ENST00000508852 A0A1W2PS18 150 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 M0QYG6 137 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 GABARAPO95166 117 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 MEF2DQ14814 521 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 TRIM16LQ309B1 348 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 DEFB135Q30KP9 77 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 ZNF600Q6ZNG1 722 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 LYG2Q86SG7 212 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 TMEM229BQ8NBD8 167 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
CCHCR1-227ENST00000508852 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 A0A0J9YWU9 116 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 MPTX1A8MV57 137 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 ZNF207O43670 478 aaKnown RBP10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 CD3DP04234 171 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 RPL5P46777 297 aaKnown RBP10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 OR52I2Q8NH67 350 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 RNASE11Q8TAA1 199 aaKnown RBP10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 KLK11Q9UBX7 282 aa10.07□□□□□ -0.8
CCHCR1-227ENST00000508852 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 RPS10-NUDT3A0A1W2PQS6 291 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 GABARAPH6UMI1 98 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 RAB3DO95716 219 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 CD74P04233 296 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 P0C879 139 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 UCP1P25874 307 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 HOXA1P49639 335 aaPredicted RBP10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 EIF2B2P49770 351 aaKnown RBP10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 CTF1Q16619 201 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 GPR107Q5VW38 600 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 FAM90A2PQ658T7 463 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 NOXA1Q86UR1 476 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 OR52E5Q8NH55 327 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 ABHD1Q96SE0 405 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
CCHCR1-227ENST00000508852 A0A0B4J293 547 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 DISC1C4P0D8 188 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 ST8SIA3O43173 380 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 TMEM50AO95807 157 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 IGKV1-5P01602 117 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 NPPCP23582 126 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 HTR2BP41595 481 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 SPCS3P61009 180 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 DHODHQ02127 395 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 SCGB2B2Q4G0G5 96 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 TMEM41BQ5BJD5 291 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 STEAP1BQ6NZ63 245 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 TOMM20LQ6UXN7 152 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 OR4X1Q8NH49 305 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 MFFQ9GZY8 342 aa10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.05□□□□□ -0.8
CCHCR1-227ENST00000508852 PUS1Q9Y606 427 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms