RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 K7EP34 96 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 PYYP10082 97 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 HERV-K104P63124 156 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 SRYQ05066 204 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 MKXQ8IYA7 352 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 C7orf61Q8IZ16 206 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 RNF183Q96D59 192 aa5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 SNRNP40Q96DI7 357 aaKnown RBP5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.99□□□□□ -1.45
LIMCH1-207ENST00000508466 KIR2DS1A0A191URI9 304 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 C9orf118A6NHY6 69 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 GGTLC3B5MD39 225 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 FCGR3BO75015 233 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 CXorf1O96002 111 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 HNRNPA1P09651 372 aaKnown RBP eCLIP5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 GDF1P27539 372 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 FCER1GP30273 86 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 KIR2DS4P43632 304 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 RHOBP62745 196 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 LOXL1Q08397 574 aaPredicted RBP5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 KIR2DS1Q14954 304 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 RTL8BQ17RB0 113 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 ZNF718Q3SXZ3 478 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 UTF1Q5T230 341 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 YAF2Q8IY57 180 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 GLMPQ8WWB7 406 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 MPC1Q9Y5U8 109 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 TMSB15BA0A087X1C1 80 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 LINC01548A6NM66 108 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 IGLV3-1P01715 115 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 STAG3L2P0CL84 134 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 STAG3L3P0CL85 134 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM120AOSQ5T036 256 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 NEGR1Q7Z3B1 354 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 SPAG8Q99932 426 aaPredicted RBP5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 GGTLC1Q9BX51 225 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 PRRG4Q9BZD6 226 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 DLL3Q9NYJ7 618 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 PSG11Q9UQ72 335 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 PCNX2A6NKB5 2137 aa5.98□□□□□ -1.45
LIMCH1-207ENST00000508466 NKX2-8O15522 239 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 SYNGR3O43761 229 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 HLA-DQA1P01909 254 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 HBZP02008 142 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 GRPP07492 148 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 C3orf36Q3SXR2 165 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 PARM1Q6UWI2 310 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 VSTM2AQ8TAG5 236 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM222BQ8WU58 562 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 LRRC29Q8WV35 223 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 CXorf51AA0A1B0GTR3 108 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PQF6 199 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 KLF7O75840 302 aaPredicted RBP5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 ACP1P24666 158 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 HIST1H1AQ02539 215 aaPredicted RBP5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 SAMD5Q5TGI4 173 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 LINC00322Q6ZN03 302 aaPredicted RBP5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 BADQ92934 168 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 SRXN1Q9BYN0 137 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 TMEM191AQ9H0A3 160 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 MED13LQ71F56 2210 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 ZZEF1O43149 2961 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 ASH1LQ9NR48 2969 aaKnown RBP5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 hCG_38984A0A1B0GV85 526 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 WNT9BO14905 357 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 IGLV2-8P01709 118 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 OR5AL1P0C617 328 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 RHBDD2Q6NTF9 364 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 ZNF826PQ6ZT77 177 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 ST8SIA1Q92185 356 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 C1orf159Q96HA4 380 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 NHP2Q9NX24 153 aaKnown RBP5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 DUSP13Q9UII6 198 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 THADAQ6YHU6 1953 aa5.97□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A0J9YW62 118 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PPM0 123 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 A0A1W2PQD3 144 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 LTAP01374 205 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 MT-ATP8P03928 68 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 APELAP0DMC3 54 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 FABP2P12104 132 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 FXYD2P54710 66 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 EDDM3AQ14507 147 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 CD300EQ496F6 205 aaPredicted RBP5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 LSM10Q969L4 123 aaKnown RBP5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 SPSB4Q96A44 273 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 PTH2Q96A98 100 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 ZNF48Q96MX3 618 aaPredicted RBP5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 MAP1LC3CQ9BXW4 147 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 CHRNA10Q9GZZ6 450 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 WDR83OSQ9Y284 106 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 TIMM9Q9Y5J7 89 aa5.96□□□□□ -1.45
LIMCH1-207ENST00000508466 SAA2-SAA4A0A096LPE2 208 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 IZUMO1RA6ND01 250 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 SCGB2A1O75556 95 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 FAM87AP0C7U9 286 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 RAB31Q13636 194 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 SLC35E4Q6ICL7 350 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms