RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 RAB40CQ96S21 281 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 ATP6V0BQ99437 205 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 SRSF8Q9BRL6 282 aaKnown RBP4□□□□□ -1.77
KDM3B-205ENST00000508386 QTRT1Q9BXR0 403 aaKnown RBP4□□□□□ -1.77
KDM3B-205ENST00000508386 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 NDUFA4L2Q9NRX3 87 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 THYN1Q9P016 225 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 XCL2Q9UBD3 114 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 PRELID3BQ9Y3B1 194 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 ORC6Q9Y5N6 252 aa4□□□□□ -1.77
KDM3B-205ENST00000508386 F11RQ9Y624 299 aaKnown RBP4□□□□□ -1.77
KDM3B-205ENST00000508386 A0A075B6Q4 140 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TRAV2A0A0B4J234 112 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 A0A1B0GU03 582 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 EFCAB10A6NFE3 127 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 DNASE2O00115 360 aaPredicted RBP3.99□□□□□ -1.77
KDM3B-205ENST00000508386 ST8SIA3O43173 380 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 DENRO43583 198 aaKnown RBP3.99□□□□□ -1.77
KDM3B-205ENST00000508386 HRASP01112 189 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 SPART-AS1P0CW21 52 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TRAPPC2P0DI81 140 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TRAPPC2BP0DI82 140 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 PTHLHP12272 177 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 HTN3P15516 51 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 DEFB1P60022 68 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 PAFAH1B2P68402 229 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TMEM41BQ5BJD5 291 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 FAM222AQ5U5X8 452 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 SPAG16Q8N0X2 631 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 DUSP18Q8NEJ0 188 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 OR56B1Q8NGI3 324 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 RAB3CQ96E17 227 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 NEU1Q99519 415 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 HSD17B10Q99714 261 aaKnown RBP3.99□□□□□ -1.77
KDM3B-205ENST00000508386 DCSTAMPQ9H295 470 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 HRASLSQ9HDD0 168 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 CCL28Q9NRJ3 127 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TMEM140Q9NV12 185 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 MRPL36Q9P0J6 103 aaKnown RBP3.99□□□□□ -1.77
KDM3B-205ENST00000508386 RABAC1Q9UI14 185 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 MRPS7Q9Y2R9 242 aaKnown RBP3.99□□□□□ -1.77
KDM3B-205ENST00000508386 NSG2Q9Y328 171 aa3.99□□□□□ -1.77
KDM3B-205ENST00000508386 TNXBP22105 4242 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 H3BMM0 161 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 SULT1C2O00338 296 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 SSX5O60225 188 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 PRM2P04554 102 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 HIST1H1DP16402 221 aaKnown RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 CD36P16671 472 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 MAPK3P27361 379 aaPredicted RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 PPP5CP53041 499 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 WNT4P56705 351 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 FAM3BP58499 235 aaPredicted RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 DLK1P80370 383 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 HAMPP81172 84 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 RELQ04864 619 aaPredicted RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 RAB11BQ15907 218 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 HSD17B12Q53GQ0 312 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 GDF5OSQ5U4N7 250 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 GSG1LQ6UXU4 331 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 CENPSQ8N2Z9 138 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 OR10R2Q8NGX6 335 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 TMEM203Q969S6 136 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 SLC25A46Q96AG3 418 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 CMTM3Q96MX0 182 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 NIPSNAP3BQ9BS92 247 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 COMMD5Q9GZQ3 224 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 PLGRKTQ9HBL7 147 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 FKBP14Q9NWM8 211 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 SMPD3Q9NY59 655 aaPredicted RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 PSORS1C1Q9UIG5 152 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 RAB22AQ9UL26 194 aa3.98□□□□□ -1.77
KDM3B-205ENST00000508386 LSM2Q9Y333 95 aaKnown RBP3.98□□□□□ -1.77
KDM3B-205ENST00000508386 IRGMA1A4Y4 181 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 RBFOX2O43251 390 aaKnown RBP eCLIP3.97□□□□□ -1.77
KDM3B-205ENST00000508386 MT-CO2P00403 227 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 NQO2P16083 231 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 BTF3P20290 206 aaKnown RBP3.97□□□□□ -1.77
KDM3B-205ENST00000508386 MFAP4P55083 255 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 OR10A3P58181 314 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 FXYD7P58549 80 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 TAS2R31P59538 309 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 OXA1LQ15070 435 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 RNF151Q2KHN1 245 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 HES5Q5TA89 166 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 C1orf158Q8N1D5 194 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 MS4A15Q8N5U1 240 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 STXBP6Q8NFX7 210 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 OR1L8Q8NGR8 309 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 OR1P1Q8NH06 330 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 HINT2Q9BX68 163 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 RNF167Q9H6Y7 350 aa3.97□□□□□ -1.77
KDM3B-205ENST00000508386 PUS1Q9Y606 427 aaKnown RBP eCLIP3.97□□□□□ -1.77
KDM3B-205ENST00000508386 SLC22A5O76082 557 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms