RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MAJINQ3KP22 176 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 GCSAMQ8N6F7 178 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 NUP35Q8NFH5 326 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 LRRC29Q8WV35 223 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 FAM167A-AS1Q96KT0 104 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 GCM1Q9NP62 436 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 PSMB11A5LHX3 300 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 TIMM8AO60220 97 aaPredicted RBP14.51□□□□□ -0.09
NUP54-205ENST00000507257 MFAP2P55001 183 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 ATOH7Q8N100 152 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 MDS2Q8NDY4 140 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 OR1L8Q8NGR8 309 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 ZNF596Q8TC21 504 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 IGKV1D-17A0A075B6S4 117 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 A0A1B0GXF2 115 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 HOXA4Q00056 320 aaPredicted RBP14.5□□□□□ -0.09
NUP54-205ENST00000507257 GDF5OSQ5U4N7 250 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 MBNL2Q5VZF2 373 aaKnown RBP14.5□□□□□ -0.09
NUP54-205ENST00000507257 ZNF714Q96N38 554 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 TMEM70Q9BUB7 260 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 CALYQ9NYX4 217 aa14.5□□□□□ -0.09
NUP54-205ENST00000507257 EYSQ5T1H1 3165 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 IGFBP4P22692 258 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 Q56UQ5 140 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 C1orf162Q8NEQ5 155 aaPredicted RBP14.49□□□□□ -0.09
NUP54-205ENST00000507257 OR4C5Q8NGB2 326 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 CACNG8Q8WXS5 425 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 DUSP13Q9UII6 198 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 SIT1Q9Y3P8 196 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 J3QR06 171 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 UPK2O00526 184 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 HIST1H1EP10412 219 aaKnown RBP14.49□□□□□ -0.09
NUP54-205ENST00000507257 ACP1P24666 158 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 COL8A2P25067 703 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 C1orf229Q6ZS94 237 aaPredicted RBP14.49□□□□□ -0.09
NUP54-205ENST00000507257 Q6ZT83 130 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 FAM168AQ92567 244 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 SLC25A2Q9BXI2 301 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 SPRR3Q9UBC9 169 aa14.49□□□□□ -0.09
NUP54-205ENST00000507257 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
NUP54-205ENST00000507257 NUDT10Q8NFP7 164 aa14.48□□□□□ -0.09
NUP54-205ENST00000507257 CHCHD1Q96BP2 118 aaKnown RBP14.48□□□□□ -0.09
NUP54-205ENST00000507257 SNRNP40Q96DI7 357 aaKnown RBP14.48□□□□□ -0.09
NUP54-205ENST00000507257 NUDT11Q96G61 164 aa14.48□□□□□ -0.09
NUP54-205ENST00000507257 C7orf69Q9H7B7 122 aa14.48□□□□□ -0.09
NUP54-205ENST00000507257 AMMECR1Q9Y4X0 333 aaPredicted RBP14.48□□□□□ -0.09
NUP54-205ENST00000507257 SOX21Q9Y651 276 aaPredicted RBP14.48□□□□□ -0.09
NUP54-205ENST00000507257 CFAP54Q96N23 3096 aa14.48□□□□□ -0.09
NUP54-205ENST00000507257 TRGV5A0A0B4J1U4 118 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 CA1P00915 261 aaPredicted RBP14.47□□□□□ -0.09
NUP54-205ENST00000507257 SAA2P0DJI9 122 aaPredicted RBP14.47□□□□□ -0.09
NUP54-205ENST00000507257 UBE2L3P68036 154 aaKnown RBP14.47□□□□□ -0.09
NUP54-205ENST00000507257 CD69Q07108 199 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 CT45A1Q5HYN5 189 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 CT45A3Q8NHU0 189 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 INS-IGF2F8WCM5 200 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 LYZL6O75951 148 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 TMEM30BQ3MIR4 351 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 FAM120AOSQ5T036 256 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 NHLRC2Q8NBF2 726 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 PLPPR2Q96GM1 343 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 ZNF355PQ9NSJ1 428 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 WDFY3Q8IZQ1 3526 aa14.47□□□□□ -0.09
NUP54-205ENST00000507257 PEX7O00628 323 aa14.46□□□□□ -0.09
NUP54-205ENST00000507257 HLA-DRB1P01911 266 aa14.46□□□□□ -0.09
NUP54-205ENST00000507257 RNASE2P10153 161 aaKnown RBP14.46□□□□□ -0.09
NUP54-205ENST00000507257 RPL8P62917 257 aaKnown RBP14.46□□□□□ -0.09
NUP54-205ENST00000507257 C17orf58Q2M2W7 97 aa14.46□□□□□ -0.09
NUP54-205ENST00000507257 CT83Q5H943 113 aa14.46□□□□□ -0.09
NUP54-205ENST00000507257 RNASEKQ6P5S7 137 aaKnown RBP14.46□□□□□ -0.09
NUP54-205ENST00000507257 LINC00696Q6ZRV3 163 aa14.46□□□□□ -0.09
NUP54-205ENST00000507257 SSBP3Q9BWW4 388 aaPredicted RBP14.46□□□□□ -0.09
NUP54-205ENST00000507257 CEACAM8P31997 349 aaPredicted RBP14.45□□□□□ -0.1
NUP54-205ENST00000507257 GUSBP1Q15486 140 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 Q6ZVH6 145 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 ZNF329Q86UD4 541 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 URB1-AS1Q96HZ7 61 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 OR4C46A6NHA9 309 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 CA7P43166 264 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 OR1L4Q8NGR5 311 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 LOXL4Q96JB6 756 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 CLCF1Q9UBD9 225 aa14.45□□□□□ -0.1
NUP54-205ENST00000507257 KBTBD11-OT1A0A1B0GTJ5 212 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 TEX50A0A1B0GTY4 177 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 HIGD1CA8MV81 97 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 IGLV1-44P01699 117 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 OR5AL1P0C617 328 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 CD46P15529 392 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 GATA2P23769 480 aaPredicted RBP14.44□□□□□ -0.1
NUP54-205ENST00000507257 HOXC12P31275 282 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 C12orf54Q6X4T0 127 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 MOB3BQ86TA1 216 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 DEFB125Q8N687 156 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 OR9G1Q8NH87 305 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 HINT2Q9BX68 163 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 DEFB127Q9H1M4 99 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 LINC00574Q9H8X3 128 aa14.44□□□□□ -0.1
NUP54-205ENST00000507257 SYS1-DBNDD2H3BUS1 97 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 TAX1BP3O14907 124 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 MYCNOSP40205 109 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms