RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 NDUFB6O95139 128 aa13.53□□□□□ -0.24
SMN1-204ENST00000506163 RNASE2P10153 161 aaKnown RBP13.53□□□□□ -0.24
SMN1-204ENST00000506163 ADMP35318 185 aa13.53□□□□□ -0.24
SMN1-204ENST00000506163 SPCS3P61009 180 aa13.53□□□□□ -0.24
SMN1-204ENST00000506163 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
SMN1-204ENST00000506163 LGI3Q8N145 548 aa13.53□□□□□ -0.24
SMN1-204ENST00000506163 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
SMN1-204ENST00000506163 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 C2orf70A6NJV1 201 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 CYB5BO43169 146 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 TGOLN2O43493 480 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 NXPH3O95157 252 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 LY86O95711 162 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 MT-CO2P00403 227 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 CENPSQ8N2Z9 138 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 SELENOKQ9Y6D0 94 aa13.52□□□□□ -0.25
SMN1-204ENST00000506163 TMEM213A2RRL7 107 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 SFT2D2O95562 160 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 CTSGP08311 255 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 GP9P14770 177 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 VAMP1P23763 118 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 HOXA1P49639 335 aaPredicted RBP13.51□□□□□ -0.25
SMN1-204ENST00000506163 MLANAQ16655 118 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 LRTM2Q8N967 370 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 PDCD10Q9BUL8 212 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 ZNF436Q9C0F3 470 aaPredicted RBP13.51□□□□□ -0.25
SMN1-204ENST00000506163 PEMTQ9UBM1 199 aa13.51□□□□□ -0.25
SMN1-204ENST00000506163 ZNF320A2RRD8 509 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 SULT1A3P0DMM9 295 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 SULT1A4P0DMN0 295 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 ANXA3P12429 323 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 FOLR2P14207 255 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 SNCAP37840 140 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 TM4SF20Q53R12 229 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 LINC00299Q6ZSB3 139 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
SMN1-204ENST00000506163 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
SMN1-204ENST00000506163 FNDC4Q9H6D8 234 aaPredicted RBP13.5□□□□□ -0.25
SMN1-204ENST00000506163 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
SMN1-204ENST00000506163 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
SMN1-204ENST00000506163 SRPXP78539 464 aa13.49□□□□□ -0.25
SMN1-204ENST00000506163 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
SMN1-204ENST00000506163 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
SMN1-204ENST00000506163 ATP6V0BQ99437 205 aa13.49□□□□□ -0.25
SMN1-204ENST00000506163 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
SMN1-204ENST00000506163 A8MWP6 167 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 PITX3O75364 302 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 ANXA7P20073 488 aaKnown RBP13.48□□□□□ -0.25
SMN1-204ENST00000506163 CBLN1P23435 193 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 FCGR2BP31994 310 aaPredicted RBP13.48□□□□□ -0.25
SMN1-204ENST00000506163 SMCO1Q147U7 214 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 DEFB114Q30KQ6 69 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 CD300EQ496F6 205 aaPredicted RBP13.48□□□□□ -0.25
SMN1-204ENST00000506163 Q56UQ5 140 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 Q8N1Y9 231 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 ENY2Q9NPA8 101 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 PTTG2Q9NZH5 202 aa13.48□□□□□ -0.25
SMN1-204ENST00000506163 IGHV3OR16-8A0A075B7F1 116 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 A0A1B0GU03 582 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 C9orf170A2RU37 121 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 LYRM1O43325 122 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 MFAP4P55083 255 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 TNFRSF9Q07011 255 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 CCDC32Q9BV29 185 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 MLXQ9UH92 298 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 ZNF785A8K8V0 405 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 CENPXA8MT69 81 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 UBE2MP61081 183 aaKnown RBP13.47□□□□□ -0.25
SMN1-204ENST00000506163 UXS1Q8NBZ7 420 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 TXN2Q99757 166 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 RBKSQ9H477 322 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
SMN1-204ENST00000506163 TBC1D24Q9ULP9 559 aa13.47□□□□□ -0.25
SMN1-204ENST00000506163 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.26
SMN1-204ENST00000506163 OR4E1P0C645 316 aa13.46□□□□□ -0.26
SMN1-204ENST00000506163 SUB1P53999 127 aaKnown RBP eCLIP13.46□□□□□ -0.26
SMN1-204ENST00000506163 DHRS2Q13268 280 aa13.46□□□□□ -0.26
SMN1-204ENST00000506163 C2orf83Q53S99 150 aa13.46□□□□□ -0.26
SMN1-204ENST00000506163 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 NDUFA4O00483 81 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 HOXB5P09067 269 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 HTR2BP41595 481 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 IFITM3Q01628 133 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 GGNBP1Q5YKI7 109 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 B9D2Q9BPU9 175 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
SMN1-204ENST00000506163 ZNF207O43670 478 aaKnown RBP13.44□□□□□ -0.26
SMN1-204ENST00000506163 ADAP1O75689 374 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 TMEM50AO95807 157 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 LYG2Q86SG7 212 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms