RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SEC14L6B5MCN3 397 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 E7EQL1 145 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 ORC5O43913 435 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 BRI3O95415 125 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CST4P01036 141 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 NMBP08949 121 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 MRPL3P09001 348 aaKnown RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TACSTD2P09758 323 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CD79AP11912 226 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TBPP20226 339 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PSMA1P25786 263 aaKnown RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 AKR1C3P42330 323 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CX3CR1P49238 355 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PPOXP50336 477 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 ZNF83P51522 516 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 HCCSP53701 268 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PPP1CBP62140 327 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 RAB11AP62491 216 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 RPL23AP62750 156 aaKnown RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 FAM3AP98173 230 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 ZNF92Q03936 586 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 EGFEM1PQ0D2K5 195 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 SURF2Q15527 256 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 SSX1Q16384 188 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 COX19Q49B96 90 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 C5orf47Q569G3 176 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 KLF17Q5JT82 389 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 AKR1C8PQ5T2L2 129 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 OR2G6Q5TZ20 316 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 ARL9Q6T311 187 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TMPRSS11AQ6ZMR5 421 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TMED4Q7Z7H5 227 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CALHM1Q8IU99 346 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PDZD9Q8IXQ8 264 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM252Q8N6L7 170 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 UBAC2Q8NBM4 344 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 OR4D6Q8NGJ1 314 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 OR56B4Q8NH76 319 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 KLF14Q8TD94 323 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 THEM6Q8WUY1 208 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 ORAOV1Q8WV07 137 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 YIPF6Q96EC8 236 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 MALSU1Q96EH3 234 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 SMIM8Q96KF7 97 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PGLYRP4Q96LB8 373 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CLCC1Q96S66 551 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 MGLLQ99685 303 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 GINS4Q9BRT9 223 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 RNF126Q9BV68 326 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 BEX2Q9BXY8 128 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 PBOV1Q9GZY1 135 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 RERGLQ9H628 205 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 HRASLSQ9HDD0 168 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 CARHSP1Q9Y2V2 147 aaKnown RBP3.82□□□□□ -1.8
NIPBL-205ENST00000505998 NPTNQ9Y639 398 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 URGCP-MRPS24S4R325 110 aa3.82□□□□□ -1.8
NIPBL-205ENST00000505998 LOC107986453A0A1B0GWG9 222 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 K7N7A8 449 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 M0R1B8 84 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 GOSR2O14653 212 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MAGEB4O15481 346 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SSNA1O43805 119 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MMP23AO75900 390 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MPC2O95563 127 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 IFNA5P01569 189 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 CD8AP01732 235 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 IGHV3-48P01763 117 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MT-ND4LP03901 98 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 UCHL1P09936 223 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 OR10J4P0C629 311 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 COX6B1P14854 86 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 IGFBP3P17936 291 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-205ENST00000505998 FUT3P21217 361 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 CFHR2P36980 270 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MPV17P39210 176 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 CEACAM3P40198 252 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 CRYBA4P53673 196 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 EIF5AP63241 154 aaKnown RBP3.81□□□□□ -1.8
NIPBL-205ENST00000505998 PSG7Q13046 419 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 HERPUD1Q15011 391 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 Q499Y3 187 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 GLYATL3Q5SZD4 288 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 C10orf91Q5T1B1 145 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 TMEM244Q5VVB8 128 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SAMD13Q5VXD3 122 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 Q6ZR03 302 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 NECAP1Q8NC96 275 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 OR5L1Q8NGL2 311 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 OR10K1Q8NGX5 313 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SLC25A40Q8TBP6 338 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 ASB13Q8WXK3 278 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 PP6455Q8WZ26 134 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SFRP2Q96HF1 295 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 OR2J1Q9GZK6 312 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 MAGT1Q9H0U3 335 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SLC2A9Q9NRM0 540 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
NIPBL-205ENST00000505998 CBLN4Q9NTU7 201 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms