RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 KLK15Q9H2R5 256 aa13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
HMGXB3-202ENST00000503427 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 UBE2CO00762 179 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 IL18BPO95998 194 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 IGHV3-35A0A0C4DH35 117 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 IGKV1-12A0A0C4DH73 117 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 FAM90A9PA6NNJ1 464 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 H7C2G1 150 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 IGKV1D-12P01611 117 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 SAA1P0DJI8 122 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 GATA2P23769 480 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 SUPT4H1P63272 117 aaKnown RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 NABP1Q96AH0 204 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 Q0VFX4 171 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 PAPPA-AS1Q5QFB9 102 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 TSC2P49815 1807 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 LINC00587B1AMM8 73 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 OR11H12B2RN74 326 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 OR11H2Q8NH07 326 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 C21orf62Q9NYP8 219 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 SCN8AQ9UQD0 1980 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 C1QTNF9BB2RNN3 333 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 RAMP3O60896 148 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HEPN1Q6WQI6 88 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 C14orf144Q96I85 54 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
HMGXB3-202ENST00000503427 PI4KAP42356 2102 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 CD55P08174 381 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 ADIPOQQ15848 244 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 FAM159AQ6UWV7 190 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 PRDM13Q9H4Q3 707 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 PRSS2P07478 247 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 C1QTNF9P0C862 333 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 SERF1AO75920 110 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 SMIM13P0DJ93 91 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 Q9H3A6 140 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
HMGXB3-202ENST00000503427 GBF1Q92538 1859 aa13.46□□□□□ -0.25
HMGXB3-202ENST00000503427 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
HMGXB3-202ENST00000503427 A0A1W2PRE2 83 aa13.46□□□□□ -0.25
HMGXB3-202ENST00000503427 FBXL7Q9UJT9 491 aa13.46□□□□□ -0.25
HMGXB3-202ENST00000503427 HIGD1CA8MV81 97 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 UBE2L6O14933 153 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 LY6EQ16553 131 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 FGFBP3Q8TAT2 258 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 ATP5LO75964 103 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 PPP1R17O96001 155 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 IGKV1D-33P01593 117 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 IGKV1-33P01594 117 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 IGKV3-15P01624 115 aa13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.26
HMGXB3-202ENST00000503427 PTPRDP23468 1912 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 A0A1B0GW64 132 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 DUTP33316 252 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 COPS9Q8WXC6 57 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 FREM3P0C091 2139 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 NAPSAO96009 420 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 RRN3P1Q2M238 152 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 NRN1Q9NPD7 142 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 OTORQ9NRC9 128 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 COLCA2A8K830 154 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 CIRBPQ14011 172 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 UNQ6494/PRO21346Q6UXR6 183 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 NLRC5Q86WI3 1866 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 TRAV1-1A0A0B4J248 108 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 ZNF56Q15929 161 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 PRSS8Q16651 343 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 FAM19A2Q8N3H0 131 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 REG4Q9BYZ8 158 aa13.45□□□□□ -0.26
HMGXB3-202ENST00000503427 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms