RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DICER1Q9UPY3 1922 aaKnown RBP1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRAV41A0A0B4J266 112 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF98A6NK75 572 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 FABP5P3A8MUU1 101 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRAPPC2LH3BP13 241 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 H3BQ85 93 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 C19orf84I3L1E1 186 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TXNDC9O14530 226 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 UBFD1O14562 309 aaKnown RBP1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 LEPROTO15243 131 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CYB5BO43169 146 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 LY6HO94772 140 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CDS2O95674 445 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 NPYP01303 97 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1-17P01599 117 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1-5P01602 117 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 BPGMP07738 259 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 GPX2P18283 190 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CD200P41217 278 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CCR2P41597 374 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 AKR1C3P42330 323 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF80P51504 273 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CKS1BP61024 79 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 YPEL3P61236 119 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 BIKQ13323 160 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 MIAQ16674 131 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 RRN3P1Q2M238 152 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 SPANXN3Q5MJ09 141 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM69Q5SWH9 247 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 PRR9Q5T870 116 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 SDIM1Q6ZPB5 146 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRAPPC6BQ86SZ2 158 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 LYPD1Q8N2G4 141 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 C10orf126Q8N4M7 172 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 ST6GALNAC3Q8NDV1 305 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR51T1Q8NGJ9 327 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR5C1Q8NGR4 320 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 CLDND2Q8NHS1 167 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 SMCR5Q8TEV8 140 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 PFDN5Q99471 154 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 DOHHQ9BU89 302 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 DERL1Q9BUN8 251 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 RTL8AQ9BWD3 113 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 SLC39A9Q9NUM3 307 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TXNL4BQ9NX01 149 aaKnown RBP1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 BRWD3Q6RI45 1802 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 TAF1LQ8IZX4 1826 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 KIAA1671Q9BY89 1806 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 OTOGLQ3ZCN5 2332 aa1.31□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1D-37A0A075B6S9 117 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGHV3OR16-8A0A075B7F1 116 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A087WX48 190 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 IGKV1D-43A0A0B4J1Z2 117 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 LOC102725191A0A1B0GVB3 256 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 A0A1B0GX51 115 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM189A5PLL7 270 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 C19orf71A6NCJ1 209 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 GGT3PA6NGU5 568 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 J3KT08 172 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TAX1BP3O14907 124 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 CST8O60676 142 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 UCHL1P09936 223 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 GZMBP10144 247 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 BCL2P10415 239 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 COX4I1P13073 169 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 RPL7P18124 248 aaKnown RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 CD24P25063 80 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 NFYBP25208 207 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 SDC4P31431 198 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 SRP14P37108 136 aaKnown RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 POLR2HP52434 150 aaKnown RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 KLF3P57682 345 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 EIF5AP63241 154 aaKnown RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 PSG9Q00887 426 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 MEF2BQ02080 365 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF117Q03924 483 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 PLCXD2Q0VAA5 305 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF141Q15928 474 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 RTL8BQ17RB0 113 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 SMIM21Q3B7S5 101 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 BCL2L15Q5TBC7 163 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 SPINT4Q6UDR6 99 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF705AQ6ZN79 300 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 ZNF767PQ75MW2 155 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 KTN1-AS1Q86SY8 53 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TMEM229BQ8NBD8 167 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 OR10P1Q8NGE3 313 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 RNASE11Q8TAA1 199 aaKnown RBP1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 MUC7Q8TAX7 377 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 CANT1Q8WVQ1 401 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TEX37Q96LM6 180 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 CGREF1Q99674 301 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 AICDAQ9GZX7 198 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 ASF1BQ9NVP2 202 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TP73-AS1Q9UF72 201 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 PCTPQ9UKL6 214 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 DOCK5Q9H7D0 1870 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TICRRQ7Z2Z1 1910 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 TRIP11Q15643 1979 aa1.3□□□□□ -2.2
HMGB1P35-201ENST00000503360 BCL9O00512 1426 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms