RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GOLT1AQ6ZVE7 132 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 OR4C13Q8NGP0 309 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 DIRC2Q96SL1 478 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 GGTLC1Q9BX51 225 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 FMC1Q96HJ9 113 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 MS4A6AQ9H2W1 248 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 PLXNA4Q9HCM2 1894 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 C7orf71A4D174 169 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 ITLN1Q8WWA0 313 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 SSBP4Q9BWG4 385 aaPredicted RBP14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 ZNF581Q9P0T4 197 aa14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 MRPS16Q9Y3D3 137 aaKnown RBP14.39□□□□□ -0.11
HMGXB3-201ENST00000502717 A0A0G2JRQ6 117 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 PPIAL4DF5H284 164 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 CDPF1Q6NVV7 123 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 OR52E5Q8NH55 327 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 FAM181BA6NEQ2 426 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 NPSP0C0P6 89 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 AMMECR1LQ6DCA0 310 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 ATP5L2Q7Z4Y8 100 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 NUDT11Q96G61 164 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 LOC107984156A0A0G2JMH3 177 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 ZNF716A6NP11 495 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 ARL17AQ8IVW1 177 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 IMMP1LQ96LU5 166 aa14.38□□□□□ -0.11
HMGXB3-201ENST00000502717 MEGF9Q9H1U4 602 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 MRPL27Q9P0M9 148 aaKnown RBP14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 OR5A1Q8NGJ0 315 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 OSR1Q8TAX0 266 aaPredicted RBP14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 SPTAN1Q13813 2472 aaKnown RBP14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 CX3CL1P78423 397 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 MRPS18CQ9Y3D5 142 aaKnown RBP14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 PLXND1Q9Y4D7 1925 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 F5H697 171 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 TMEM50AO95807 157 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 ATP5J2P56134 94 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 Q6ZRM9 215 aa14.37□□□□□ -0.11
HMGXB3-201ENST00000502717 C15orf61A6NNL5 157 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 TSKUQ8WUA8 353 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 COX11Q9Y6N1 276 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 SLC25A17O43808 307 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 GATA2P23769 480 aaPredicted RBP14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 SPANXN1Q5VSR9 72 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 CDCP2Q5VXM1 449 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 Q6AWC8 147 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 OR4X2Q8NGF9 303 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 PRELID3AQ96N28 172 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 H3BTX0 84 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 GP6Q9HCN6 339 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 OR9G9P0C7N8 305 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 FGFBP3Q8TAT2 258 aa14.36□□□□□ -0.11
HMGXB3-201ENST00000502717 PPIAL4EA0A075B759 164 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 LILRA1O75019 489 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 PPIAL4FP0DN26 164 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 PAX9P55771 341 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 ZNF841Q6ZN19 808 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 NUDT10Q8NFP7 164 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 PPIAL4AQ9Y536 164 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 HEATR5AQ86XA9 2040 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 MRPL14Q6P1L8 145 aaKnown RBP14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 OR2K2Q8NGT1 345 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 NEUROG1Q92886 237 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 ZNF257Q9Y2Q1 563 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 RNF115Q9Y4L5 304 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 YPEL1O60688 119 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 FOXL2NBQ6ZUU3 175 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 YPEL2Q96QA6 119 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 CLEC5AQ9NY25 188 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 SDK2Q58EX2 2172 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 LIME1Q9H400 295 aa14.35□□□□□ -0.11
HMGXB3-201ENST00000502717 CD40P25942 277 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 DLX1P56177 255 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 PLXNA2O75051 1894 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 IQCF6A8MYZ5 107 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 NPIPB11E5RHQ5 1161 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 AREGP15514 252 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 LGALS7P47929 136 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 COA6Q5JTJ3 125 aaKnown RBP14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 ZNRF1Q8ND25 227 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 TMEM186Q96B77 213 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 IGHV3-48P01763 117 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 SELLP14151 372 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 PSG7Q13046 419 aa14.34□□□□□ -0.11
HMGXB3-201ENST00000502717 LOC102723996A0A087X1L8 192 aa14.33□□□□□ -0.11
HMGXB3-201ENST00000502717 LCN12Q6JVE5 192 aa14.33□□□□□ -0.11
HMGXB3-201ENST00000502717 TTC9CQ8N5M4 171 aa14.33□□□□□ -0.11
HMGXB3-201ENST00000502717 DCTN5Q9BTE1 182 aa14.33□□□□□ -0.11
HMGXB3-201ENST00000502717 MOSP00540 346 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 ZNF726P1Q15940 193 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 PPP1R32Q7Z5V6 425 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 C5orf24Q7Z6I8 188 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 RIPPLY3P57055 190 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 YPEL3P61236 119 aaPredicted RBP14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 BMPERQ8N8U9 685 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 E9PLN8 166 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 PSG9Q00887 426 aa14.33□□□□□ -0.12
HMGXB3-201ENST00000502717 MPV17L2Q567V2 206 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms