RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	C1QTNF4	Q9BXJ3	329 aa		13.77	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	FKBP11	Q9NYL4	201 aa		13.77	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334		A0A1W2PS18	150 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MARCH11	A6NNE9	402 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334		I3L2K1	104 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334		K7EQG2	157 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	PPY	P01298	95 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	NUTF2	P61970	127 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	AADACL3	Q5VUY0	350 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	RNF167	Q9H6Y7	350 aa		13.76	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TMEM235	A6NFC5	223 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	CASQ2	O14958	399 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MT-CO2	P00403	227 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	ZNF688	P0C7X2	276 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MLLT11	Q13015	90 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	ZNF367	Q7RTV3	350 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TPRA1	Q86W33	373 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	CADM3	Q8N126	398 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	STXBP6	Q8NFX7	210 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	PRND	Q9UKY0	176 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	NSG2	Q9Y328	171 aa		13.75	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	SSX5	O60225	188 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	SCGN	O76038	276 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	RAB3B	P20337	219 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	NPPC	P23582	126 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	BEST4	Q8NFU0	473 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MOB3A	Q96BX8	217 aa		13.74	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TMEM189	A5PLL7	270 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	KRAS	P01116	189 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	IGHV3-48	P01763	117 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MYL9	P24844	172 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	NPBWR1	P48145	328 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	FXYD4	P59646	89 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	ZNF600	Q6ZNG1	722 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	ZNF818P	Q6ZRF7	136 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	BORCS5	Q969J3	196 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	RAB40C	Q96S21	281 aa		13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	LRP1B	Q9NZR2	4599 aa		13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	F2R	P25116	425 aa		13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	FAM3B	P58499	235 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TSPAN14	Q8NG11	270 aa		13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	PINX1	Q96BK5	328 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	MGLL	Q99685	303 aa		13.72	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	PTHLH	P12272	177 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	LPAR6	P43657	344 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	EMP1	P54849	157 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	NEU1	Q99519	415 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	ZFAND3	Q9H8U3	227 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	XCL2	Q9UBD3	114 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TMED3	Q9Y3Q3	217 aa		13.71	□□□□□ -0.21
CDK5RAP2-218	ENST00000491334	TEX48	A0A1B0GUV7	120 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	SMIM9	A6NGZ8	99 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	FGF9	P31371	208 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	G6PC	P35575	357 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	DCANP1	Q8TF63	244 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	NARS2	Q96I59	477 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	TSC22D3	Q99576	134 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	TPRKB	Q9Y3C4	175 aa		13.7	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	GNRHR	P30968	328 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	P2RY1	P47900	373 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	EIF2B2	P49770	351 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	KCTD21	Q4G0X4	260 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	TMEM17	Q86X19	198 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	C6orf223	Q8N319	242 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ZNF114	Q8NC26	417 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	FCAMR	Q8WWV6	532 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	METTL26	Q96S19	204 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	NIPSNAP3B	Q9BS92	247 aa		13.69	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334		A0A1B0GU03	582 aa		13.68	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	TMEM50A	O95807	157 aa		13.68	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	PSMG4	Q5JS54	123 aa		13.68	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	HOGA1	Q86XE5	327 aa		13.68	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	APOB	P04114	4563 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	NACA	E9PAV3	2078 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	RGS10	O43665	173 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	PGLYRP1	O75594	196 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	HTN3	P15516	51 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	CRYBB3	P26998	211 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ERH	P84090	104 aa	Known RBP	13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	DHRS2	Q13268	280 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ATG101	Q9BSB4	218 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	DUSP21	Q9H596	190 aa		13.67	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	HELT	A6NFD8	242 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	DBX1	A6NMT0	343 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	RLN1	P04808	185 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	AP2S1	P53680	142 aa	Predicted RBP	13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	HERV-K104	P61576	105 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	DKK2	Q9UBU2	259 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	RFNG	Q9Y644	331 aa		13.66	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	NBDY	A0A0U1RRE5	68 aa		13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ZNF705D	P0CH99	300 aa	Predicted RBP	13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	ZNF705B	P0CI00	300 aa	Predicted RBP	13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	OXA1L	Q15070	435 aa		13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	FAM222A	Q5U5X8	452 aa		13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	OR4A16	Q8NH70	328 aa		13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.65	□□□□□ -0.22
CDK5RAP2-218	ENST00000491334	TRDV1	A0A1B0GX56	115 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms