RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CENPVQ7Z7K6 275 aaPredicted RBP9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 GPR82Q96P67 336 aa9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 NUP210Q8TEM1 1887 aaPredicted RBP9.41□□□□□ -0.9
CRNKL1-204ENST00000490910 GTF3C1Q12789 2109 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 DOCK7Q96N67 2140 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 C5orf67F2Z3F1 127 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 CKS2P33552 79 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 PTGDSP41222 190 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 SCGB1D4Q6XE38 83 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 NUP35Q8NFH5 326 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 HIST1H4GQ99525 98 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 DLL1O00548 723 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 MGST3O14880 152 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 FTH1P19P0C7X4 201 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 NTF4P34130 210 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 ZADH2Q8N4Q0 377 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 KLF13Q9Y2Y9 288 aaPredicted RBP9.4□□□□□ -0.9
CRNKL1-204ENST00000490910 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 A0A1B0GUT8 65 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 MPV17P39210 176 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 PRR31Q5SQ13 230 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 DEFB125Q8N687 156 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.91
CRNKL1-204ENST00000490910 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 USF3Q68DE3 2245 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 VEGFBP49765 207 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 SLAQ13239 276 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 RSPO1Q2MKA7 263 aaPredicted RBP9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 NHP2Q9NX24 153 aaKnown RBP9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 A0A0G2JMM0 328 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 A0A1W2PPB8 328 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 KIR3DP1A8MWS1 328 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 NPIPB11E5RHQ5 1161 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 H3BVH4 76 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 GUSBP1Q15486 140 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 SPINK14Q6IE38 97 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 FOXL2NBQ6ZUU3 175 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 FSCN3Q9NQT6 498 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 ABCA7Q8IZY2 2146 aa9.39□□□□□ -0.91
CRNKL1-204ENST00000490910 H3BTX0 84 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 SPRY3O43610 288 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 MORN2Q502X0 79 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 ZNF788Q6ZQV5 615 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 RND1Q92730 232 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 SLC25A33Q9BSK2 321 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 SH2D7A6NKC9 451 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 NCBP2LA6PVI3 153 aaKnown RBP9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 WNT9BO14905 357 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 NDUFB8O95169 186 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 C3AR1Q16581 482 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 NRN1LQ496H8 165 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 ANOS1P23352 680 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 C6orf15Q6UXA7 325 aaPredicted RBP9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 OR13A1Q8NGR1 328 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 MYOZ3Q8TDC0 251 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 IFI27L2Q9H2X8 130 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 LOC105371242A0A075B767 164 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 ZNF716A6NP11 495 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 PPIAL4GP0DN37 164 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 Q1RN00 199 aa9.38□□□□□ -0.91
CRNKL1-204ENST00000490910 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 IGHV3-48P01763 117 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 ACP1P24666 158 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 CACNG7P62955 275 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 OR52E5Q8NH55 327 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 SAP30O75446 220 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 WNT2P09544 360 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 GNG5P63218 68 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 PCOLCEQ15113 449 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 TTC9CQ8N5M4 171 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 LEAP2Q969E1 77 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 LOXL2Q9Y4K0 774 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 NOTCH4Q99466 2003 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 IGHV1-45A0A0A0MS14 117 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 A6NJY4 79 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 H3BRM9 83 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 K7EN84 100 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 PYYP10082 97 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms