RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 OR11H1Q8NG94 326 aa14.97□□□□□ -0.01
PCOLCE-208ENST00000487172 EEF1AKMT3Q96AZ1 226 aa14.97□□□□□ -0.01
PCOLCE-208ENST00000487172 RAX2Q96IS3 184 aa14.97□□□□□ -0.01
PCOLCE-208ENST00000487172 OR5B12Q96R08 314 aa14.97□□□□□ -0.01
PCOLCE-208ENST00000487172 RANGRFQ9HD47 186 aaPredicted RBP14.97□□□□□ -0.01
PCOLCE-208ENST00000487172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 TRBV7-1A0A0A6YYK4 115 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 K7EIM0 57 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 POLR2GP62487 172 aaKnown RBP eCLIP14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 FHL3Q13643 280 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 EXOSC2Q13868 293 aaKnown RBP14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 PRR31Q5SQ13 230 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 ATP6V0BQ99437 205 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 MAGT1Q9H0U3 335 aa14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 PEF1Q9UBV8 284 aaKnown RBP14.96□□□□□ -0.01
PCOLCE-208ENST00000487172 ANK2Q01484 3957 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 MFSD2BA6NFX1 497 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 I3L2K1 104 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 WRBO00258 174 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 GOSR2O14653 212 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 NPY1RP25929 384 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 ZNF616Q08AN1 781 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 DEFB136Q30KP8 78 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 OR1N2Q8NGR9 330 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 RNASEH2CQ8TDP1 164 aaKnown RBP14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 SCARB1Q8WTV0 552 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 TMEM170AQ8WVE7 144 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 DPF1Q92782 380 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 MISP3Q96FF7 219 aa14.95□□□□□ -0.02
PCOLCE-208ENST00000487172 IFNA10P01566 189 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 MBPP02686 304 aaPredicted RBP14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 PF4P02776 101 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 IAPPP10997 89 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 FCGR2BP31994 310 aaPredicted RBP14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 RPP30P78346 268 aaKnown RBP14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 CYCSP99999 105 aaKnown RBP14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 C11orf87Q6NUJ2 197 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 ZNF502Q8TBZ5 544 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 SMIM8Q96KF7 97 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 RAB40CQ96S21 281 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 NMES1Q9C002 83 aa14.94□□□□□ -0.02
PCOLCE-208ENST00000487172 IGHV4OR15-8A0A075B7B6 117 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 A0A087WW49 117 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 LINC01619G3V211 115 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 SCGB1D2O95969 90 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 MT-CO2P00403 227 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 CCDC140Q96MF4 163 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 TXN2Q99757 166 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 C21orf62Q9NYP8 219 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 MGAT4CQ9UBM8 478 aa14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 RCL1Q9Y2P8 373 aaKnown RBP14.93□□□□□ -0.02
PCOLCE-208ENST00000487172 ANKRD34BA5PLL1 514 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 SIX6O95475 246 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 OR8U8P0C7N1 319 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 PAX9P55771 341 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 TAS2R30P59541 319 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 RAB11AP62491 216 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 WFDC9Q8NEX5 89 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 PINX1Q96BK5 328 aaKnown RBP14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 DUX3Q96PT4 197 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 MED28Q9H204 178 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 S4R3C0 116 aa14.92□□□□□ -0.02
PCOLCE-208ENST00000487172 C15orf62A8K5M9 175 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 K7EPK0 472 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 SSSCA1O60232 199 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 TRBV12-3P01733 135 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 ZP3P21754 424 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 H2BFSP57053 126 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 CLEC19AQ6UXS0 136 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 LINC00482Q8N8I6 264 aa14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 FNDC4Q9H6D8 234 aaPredicted RBP14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 GAR1Q9NY12 217 aaKnown RBP14.91□□□□□ -0.02
PCOLCE-208ENST00000487172 IGHV3-21A0A0B4J1V1 117 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 RPS10-NUDT3A0A1W2PQS6 291 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 F8W735 103 aaPredicted RBP14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 TMEM50AO95807 157 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 CLEC3BP05452 202 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 OPRK1P41145 380 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 MFAP4P55083 255 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 C11orf1Q9H5F2 150 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 PSENENQ9NZ42 101 aa14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 STRAPQ9Y3F4 350 aaKnown RBP14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 LSM5Q9Y4Y9 91 aaKnown RBP14.9□□□□□ -0.02
PCOLCE-208ENST00000487172 BMPR1BO00238 502 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 TSC22D2O75157 780 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 GGCTO75223 188 aaKnown RBP14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 CD69Q07108 199 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 RAB32Q13637 225 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 SPANXN5Q5MJ07 72 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 ETFRF1Q6IPR1 90 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 TREML4Q6UXN2 200 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 OR4C12Q96R67 309 aa14.89□□□□□ -0.03
PCOLCE-208ENST00000487172 TGOLN2O43493 480 aa14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 IFNA4P05014 189 aa14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 SLC25A4P12235 298 aa14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 CXCL3P19876 107 aa14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 PVALBP20472 110 aaPredicted RBP14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 HOXD3P31249 432 aaPredicted RBP14.88□□□□□ -0.03
PCOLCE-208ENST00000487172 GPR183P32249 361 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms