RNA–Protein interactions for RNA: ENST00000485213.1

RBM3-206, Transcript of RNA binding motif protein 3, human

TSL 2

Gene RBM3, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-206	ENST00000485213	TRIM16L	Q309B1	348 aa		13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	ZNF57	Q68EA5	555 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	CCDC71L	Q8N9Z2	235 aa		13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	MISP3	Q96FF7	219 aa		13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	BSCL2	Q96G97	398 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	ATP6V0B	Q99437	205 aa		13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	RETN	Q9HD89	108 aa		13.88	□□□□□ -0.19
RBM3-206	ENST00000485213	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	FABP12	A6NFH5	140 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	ZNF207	O43670	478 aa	Known RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	FCGR2B	P31994	310 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	AKR1C2	P52895	323 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	ELL	P55199	621 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	SUPT4H1	P63272	117 aa	Known RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	GTSCR1	Q86UQ5	136 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	GPR146	Q96CH1	333 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	CITED4	Q96RK1	184 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	RSL24D1	Q9UHA3	163 aa	Known RBP	13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	RABL2B	Q9UNT1	228 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	RYR3	Q15413	4870 aa		13.87	□□□□□ -0.19
RBM3-206	ENST00000485213	SCAF4	O95104	1147 aa	Known RBP	13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	MLANA	Q16655	118 aa		13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	BSX	Q3C1V8	233 aa		13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	CCDC190	Q86UF4	302 aa		13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	UBAC2	Q8NBM4	344 aa		13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	MRPL27	Q9P0M9	148 aa	Known RBP	13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	CSMD3	Q7Z407	3707 aa		13.86	□□□□□ -0.19
RBM3-206	ENST00000485213	NDUFA4	O00483	81 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	NOL3	O60936	208 aa	Known RBP	13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	TMEM187	Q14656	261 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213		Q56UQ5	140 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	SPSB3	Q6PJ21	355 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	OR1L6	Q8NGR2	347 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	TMEM170A	Q8WVE7	144 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	EDA2R	Q9HAV5	297 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	C14orf166	Q9Y224	244 aa	Known RBP	13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	UFC1	Q9Y3C8	167 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	TMEM56-RWDD3	S4R434	201 aa		13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.85	□□□□□ -0.19
RBM3-206	ENST00000485213	OR11H12	B2RN74	326 aa		13.84	□□□□□ -0.19
RBM3-206	ENST00000485213	CYB5B	O43169	146 aa		13.84	□□□□□ -0.19
RBM3-206	ENST00000485213	MARC2	Q969Z3	335 aa		13.84	□□□□□ -0.19
RBM3-206	ENST00000485213	PRRT1	Q99946	306 aa		13.84	□□□□□ -0.19
RBM3-206	ENST00000485213	PALMD	Q9NP74	551 aa		13.84	□□□□□ -0.19
RBM3-206	ENST00000485213	STARD9	Q9P2P6	4700 aa		13.83	□□□□□ -0.19
RBM3-206	ENST00000485213	B3GALNT1	O75752	331 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	MFAP4	P55083	255 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	SLC35G3	Q8N808	338 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	RBPMS	Q93062	196 aa	Known RBP	13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	PINX1	Q96BK5	328 aa	Known RBP	13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	GALNT14	Q96FL9	552 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	HIPK2	Q9H2X6	1198 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	TUBA4B	Q9H853	241 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	SRD5A3	Q9H8P0	318 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	DAZ1	Q9NQZ3	744 aa	Known RBP	13.83	□□□□□ -0.2
RBM3-206	ENST00000485213	CACNG5	Q9UF02	275 aa		13.83	□□□□□ -0.2
RBM3-206	ENST00000485213		K7EMT4	169 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	IFNA17	P01571	189 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	ERH	P84090	104 aa	Known RBP	13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	DHODH	Q02127	395 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	TMEM268	Q5VZI3	342 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	OR10C1	Q96KK4	312 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	TXN2	Q99757	166 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	C20orf24	Q9BUV8	137 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	ZMAT4	Q9H898	229 aa		13.82	□□□□□ -0.2
RBM3-206	ENST00000485213	IGHV3-49	A0A0A0MS15	119 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	TRAV25	A0A0B4J276	109 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	CCDC160	A6NGH7	325 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	PYDC2	Q56P42	97 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	LILRB2	Q8N423	598 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	RRNAD1	Q96FB5	475 aa	Known RBP	13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	FAM110A	Q9BQ89	295 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	ZFAND3	Q9H8U3	227 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	MCUB	Q9NWR8	336 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213	SMPX	Q9UHP9	88 aa		13.81	□□□□□ -0.2
RBM3-206	ENST00000485213		A0A1B0GU03	582 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	CHEK1	O14757	476 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	TSPAN4	O14817	238 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	ATG12	O94817	140 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	TMEM50A	O95807	157 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	APOH	P02749	345 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	HOXA1	P49639	335 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	SPCS3	P61009	180 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	ODF3L2	Q3SX64	289 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	NMS	Q5H8A3	153 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	FAM219A	Q8IW50	185 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	OR52B4	Q8NGK2	314 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	OR52E5	Q8NH55	327 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	MUC7	Q8TAX7	377 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	RNF2	Q99496	336 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	SDHC	Q99643	169 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	SPATA25	Q9BR10	227 aa		13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM3-206	ENST00000485213	IGHV7-4-1	A0A0J9YVY3	117 aa		13.79	□□□□□ -0.2
RBM3-206	ENST00000485213	C15orf62	A8K5M9	175 aa		13.79	□□□□□ -0.2
RBM3-206	ENST00000485213	ZNF701	M0R085	212 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM3-206	ENST00000485213	NXPH3	O95157	252 aa		13.79	□□□□□ -0.2
RBM3-206	ENST00000485213	TOMM20L	Q6UXN7	152 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms